Information for 7-AAAGCTTTGC (Motif 16)

C G T A T G C A T G C A A T C G A G T C A C G T C G A T G A C T A C T G A T G C
Reverse Opposite:
A T C G A G T C C T G A G C T A C G T A A C T G A T G C A C G T A C G T G C A T
p-value:1e-8
log p-value:-1.875e+01
Information Content per bp:1.834
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif163.0
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets56.4 +/- 23.9bp
Average Position of motif in Background46.2 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AAAGCTTTGC
CAAGCTT---
 C G T A T G C A T G C A A T C G A G T C A C G T C G A T G A C T A C T G A T G C
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAAGCTTTGC
AAATCACTGC
 C G T A T G C A T G C A A T C G A G T C A C G T C G A T G A C T A C T G A T G C
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAAGCTTTGC-
AAATCACAGCA
 C G T A T G C A T G C A A T C G A G T C A C G T C G A T G A C T A C T G A T G C A C G T
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AAAGCTTTGC
--NGCTN---
 C G T A T G C A T G C A A T C G A G T C A C G T C G A T G A C T A C T G A T G C
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AAAGCTTTGC---
---CCTTTGATGT
 C G T A T G C A T G C A A T C G A G T C A C G T C G A T G A C T A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

PB0161.1_Rxra_2/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AAAGCTTTGC--
NNNNCAACCTTCGNGA
 A C G T A C G T A C G T A C G T C G T A T G C A T G C A A T C G A G T C A C G T C G A T G A C T A C T G A T G C A C G T A C G T
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AAAGCTTTGC---
---YCTTTGTTCC
 C G T A T G C A T G C A A T C G A G T C A C G T C G A T G A C T A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AAAGCTTTGC---
---CCWTTGTYYB
 C G T A T G C A T G C A A T C G A G T C A C G T C G A T G A C T A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AAAGCTTTGC
BAACAGCTGT--
 A C G T A C G T C G T A T G C A T G C A A T C G A G T C A C G T C G A T G A C T A C T G A T G C
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AAAGCTTTGC
----CTTTGT
 C G T A T G C A T G C A A T C G A G T C A C G T C G A T G A C T A C T G A T G C
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T