Information for 5-TCCCCAAGCACAG (Motif 11)

A C G T A G T C A G T C A G T C A G T C C G T A C G T A A T C G A T G C C G T A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G A T A T C G A T G C A C G T A C G T A C T G A C T G A C T G A C T G T C G A
p-value:1e-9
log p-value:-2.272e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.2 +/- 24.2bp
Average Position of motif in Background57.0 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TCCCCAAGCACAG
---CCAGGAACAG
 A C G T A G T C A G T C A G T C A G T C C G T A C G T A A T C G A T G C C G T A A G T C C G T A A C T G
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCCCCAAGCACAG
TCCCCA-------
 A C G T A G T C A G T C A G T C A G T C C G T A C G T A A T C G A T G C C G T A A G T C C G T A A C T G
A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TCCCCAAGCACAG
---CAAAGGTCAG
 A C G T A G T C A G T C A G T C A G T C C G T A C G T A A T C G A T G C C G T A A G T C C G T A A C T G
A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TCCCCAAGCACAG
---NAAACCACAG
 A C G T A G T C A G T C A G T C A G T C C G T A C G T A A T C G A T G C C G T A A G T C C G T A A C T G
A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCCCCAAGCACAG
--NTCAAGGTCA-
 A C G T A G T C A G T C A G T C A G T C C G T A C G T A A T C G A T G C C G T A A G T C C G T A A C T G
A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCCCCAAGCACAG
--BTCAAGGTCA-
 A C G T A G T C A G T C A G T C A G T C C G T A C G T A A T C G A T G C C G T A A G T C C G T A A C T G
A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TCCCCAAGCACAG-
----AAACCACAGC
 A C G T A G T C A G T C A G T C A G T C C G T A C G T A A T C G A T G C C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TCCCCAAGCACAG--
----AAATCACAGCA
 A C G T A G T C A G T C A G T C A G T C C G T A C G T A A T C G A T G C C G T A A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TCCCCAAGCACAG-
----CAAGGHCANV
 A C G T A G T C A G T C A G T C A G T C C G T A C G T A A T C G A T G C C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TCCCCAAGCACAG--
----AAACCACAGAN
 A C G T A G T C A G T C A G T C A G T C C G T A C G T A A T C G A T G C C G T A A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C