Information for 2-GTCAGCCGGG (Motif 7)

A C T G C G A T G T A C C G T A A T C G A G T C T G A C C T A G T C A G A T C G
Reverse Opposite:
A T G C A G T C A G T C A C T G A C T G T A G C C G A T C A T G C G T A A G T C
p-value:1e-11
log p-value:-2.579e+01
Information Content per bp:1.835
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif123.1
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets40.0 +/- 24.7bp
Average Position of motif in Background48.9 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GTCAGCCGGG
TGAGTCAGCA---
 A C G T A C G T A C G T A C T G C G A T G T A C C G T A A T C G A G T C T G A C C T A G T C A G A T C G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTCAGCCGGG-
GTCAGCANNTN
 A C T G C G A T G T A C C G T A A T C G A G T C T G A C C T A G T C A G A T C G A C G T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTCAGCCGGG--
CACAGCAGGGGG
 A C T G C G A T G T A C C G T A A T C G A G T C T G A C C T A G T C A G A T C G A C G T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTCAGCCGGG----
DCHCAGCAGGRGGCC
 A C G T A C T G C G A T G T A C C G T A A T C G A G T C T G A C C T A G T C A G A T C G A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTCAGCCGGG
DCTCAGCAGG-
 A C G T A C T G C G A T G T A C C G T A A T C G A G T C T G A C C T A G T C A G A T C G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

Mafb/MA0117.2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTCAGCCGGG-
NGTCAGCANTTT
 A C G T A C T G C G A T G T A C C G T A A T C G A G T C T G A C C T A G T C A G A T C G A C G T
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTCAGCCGGG
--CAGCC---
 A C T G C G A T G T A C C G T A A T C G A G T C T G A C C T A G T C A G A T C G
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTCAGCCGGG
VBTGWCAGCB---
 A C G T A C G T A C G T A C T G C G A T G T A C C G T A A T C G A G T C T G A C C T A G T C A G A T C G
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTCAGCCGGG
ACGTCATC----
 A C G T A C G T A C T G C G A T G T A C C G T A A T C G A G T C T G A C C T A G T C A G A T C G
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTCAGCCGGG
NTGTCAN-----
 A C G T A C G T A C T G C G A T G T A C C G T A A T C G A G T C T G A C C T A G T C A G A T C G
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T