Information for 2-CAGTGGGGTCCCT (Motif 2)

A G T C C T G A A C T G C G A T A C T G A C T G A C T G A C T G C G A T A G T C A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G C T A G A C T G C G T A A G T C A G T C A G T C A G T C C G T A A G T C A G C T A C T G
p-value:1e-13
log p-value:-3.156e+01
Information Content per bp:1.925
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.4 +/- 26.8bp
Average Position of motif in Background56.5 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CAGTGGGGTCCCT
CAGTGTGGTCGC-
 A G T C C T G A A C T G C G A T A C T G A C T G A C T G A C T G C G A T A G T C A G T C A G T C A C G T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CAGTGGGGTCCCT
--NRRGGGTCTT-
 A G T C C T G A A C T G C G A T A C T G A C T G A C T G A C T G C G A T A G T C A G T C A G T C A C G T
A C G T A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CAGTGGGGTCCCT-
NTNTGGGGGGTCNNNA
 A C G T A C G T A G T C C T G A A C T G C G A T A C T G A C T G A C T G A C T G C G A T A G T C A G T C A G T C A C G T A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

PB0156.1_Plagl1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAGTGGGGTCCCT---
GCTGGGGGGTACCCCTT
 A C G T A G T C C T G A A C T G C G A T A C T G A C T G A C T G A C T G C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CAGTGGGGTCCCT----
-----AGGTCTCTAACC
 A G T C C T G A A C T G C G A T A C T G A C T G A C T G A C T G C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAGTGGGGTCCCT--
AGAGCGGGGTCAAGTA
 A C G T A G T C C T G A A C T G C G A T A C T G A C T G A C T G A C T G C G A T A G T C A G T C A G T C A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAGTGGGGTCCCT---
TTGGGGGCGCCCCTAG
 A G T C C T G A A C T G C G A T A C T G A C T G A C T G A C T G C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAGTGGGGTCCCT
--GTGGGCCCCA-
 A G T C C T G A A C T G C G A T A C T G A C T G A C T G A C T G C G A T A G T C A G T C A G T C A C G T
A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAGTGGGGTCCCT---
CTCCAGGGGTCAATTGA
 A C G T A G T C C T G A A C T G C G A T A C T G A C T G A C T G A C T G C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGTGGGGTCCCT---
NTNNNGGGGTCANGNNN
 A C G T A G T C C T G A A C T G C G A T A C T G A C T G A C T G A C T G C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A