Information for 4-TCCTCTGCGGYCTTTG (Motif 18)

A G C T A G T C A G T C A C G T A G T C A C G T A C T G A T G C A C T G A C T G A G C T A G T C A C G T A C G T A C G T A C T G
Reverse Opposite:
G T A C C G T A C G T A C G T A A C T G C T A G A G T C A G T C A T C G A G T C C G T A C T A G C G T A A C T G A C T G C T G A
p-value:1e-8
log p-value:-1.923e+01
Information Content per bp:1.898
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.8 +/- 29.8bp
Average Position of motif in Background58.4 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TCCTCTGCGGYCTTTG
---TTTGCGGTTT---
 A G C T A G T C A G T C A C G T A G T C A C G T A C T G A T G C A C T G A C T G A G C T A G T C A C G T A C G T A C G T A C T G
A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCCTCTGCGGYCTTTG
TCCCCTGGGGAC----
 A G C T A G T C A G T C A C G T A G T C A C G T A C T G A T G C A C T G A C T G A G C T A G T C A C G T A C G T A C G T A C T G
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCCTCTGCGGYCTTTG
--GTCTGTGGTTT---
 A G C T A G T C A G T C A C G T A G T C A C G T A C T G A T G C A C T G A C T G A G C T A G T C A C G T A C G T A C G T A C T G
A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:TCCTCTGCGGYCTTTG------
-------TGGACTTTGNNCTCN
 A G C T A G T C A G T C A C G T A G T C A C G T A C T G A T G C A C T G A C T G A G C T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TCCTCTGCGGYCTTTG
----TTGCGGTTT---
 A G C T A G T C A G T C A C G T A G T C A C G T A C T G A T G C A C T G A C T G A G C T A G T C A C G T A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TCCTCTGCGGYCTTTG-
-----AGGVNCCTTTGT
 A G C T A G T C A G T C A C G T A G T C A C G T A C T G A T G C A C T G A C T G A G C T A G T C A C G T A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:TCCTCTGCGGYCTTTG-------
-------TGGACTTTGNNCTNTG
 A G C T A G T C A G T C A C G T A G T C A C G T A C T G A T G C A C T G A C T G A G C T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TCCTCTGCGGYCTTTG---
---NNATTGGACTTTNGNN
 A G C T A G T C A G T C A C G T A G T C A C G T A C T G A T G C A C T G A C T G A G C T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TCCTCTGCGGYCTTTG
GGGGCCGAGGCCTG--
 A G C T A G T C A G T C A C G T A G T C A C G T A C T G A T G C A C T G A C T G A G C T A G T C A C G T A C G T A C G T A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TCCTCTGCGGYCTTTG
----NCGCGGACGTTG
 A G C T A G T C A G T C A C G T A G T C A C G T A C T G A T G C A C T G A C T G A G C T A G T C A C G T A C G T A C G T A C T G
A C G T A C G T A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G