Information for 10-MCCGTATTTC (Motif 28)

G T C A A G T C G T A C C T A G A C G T C G T A A G C T A G C T A G C T A G T C
Reverse Opposite:
A C T G C T G A C T G A C T G A A C G T G T C A A G T C C A T G C T A G C A G T
p-value:1e-7
log p-value:-1.771e+01
Information Content per bp:1.834
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif75.6
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets53.3 +/- 28.5bp
Average Position of motif in Background51.3 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0106.1_Arid5a_2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----MCCGTATTTC---
TNNTTTCGTATTNNANN
 A C G T A C G T A C G T A C G T G T C A A G T C G T A C C T A G A C G T C G T A A G C T A G C T A G C T A G T C A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:MCCGTATTTC-----
-----ATTTCCTGTN
 G T C A A G T C G T A C C T A G A C G T C G T A A G C T A G C T A G C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

PB0024.1_Gcm1_1/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----MCCGTATTTC-
TCGTACCCGCATCATT
 A C G T A C G T A C G T A C G T A C G T G T C A A G T C G T A C C T A G A C G T C G T A A G C T A G C T A G C T A G T C A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

Gata4/MA0482.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:MCCGTATTTC--
-TCTTATCTCCC
 G T C A A G T C G T A C C T A G A C G T C G T A A G C T A G C T A G C T A G T C A C G T A C G T
A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C

PB0012.1_Elf3_1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:MCCGTATTTC------
---TTACTTCCTNGTN
 G T C A A G T C G T A C C T A G A C G T C G T A A G C T A G C T A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T

SPDEF/MA0686.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-MCCGTATTTC
ACCCGGATGTA
 A C G T G T C A A G T C G T A C C T A G A C G T C G T A A G C T A G C T A G C T A G T C
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

Gata1/MA0035.3/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:MCCGTATTTC-
TTCTTATCTGT
 G T C A A G T C G T A C C T A G A C G T C G T A A G C T A G C T A G C T A G T C A C G T
A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:MCCGTATTTC---
---CTATTTTTGG
 G T C A A G T C G T A C C T A G A C G T C G T A A G C T A G C T A G C T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:MCCGTATTTC
NNCTTATCTN
 G T C A A G T C G T A C C T A G A C G T C G T A A G C T A G C T A G C T A G T C
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:MCCGTATTTC
NCCTTATCTG
 G T C A A G T C G T A C C T A G A C G T C G T A A G C T A G C T A G C T A G T C
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G