p-value: | 1e-12 |
log p-value: | -2.904e+01 |
Information Content per bp: | 1.879 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.81% |
Number of Background Sequences with motif | 3.8 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 53.3 +/- 30.4bp |
Average Position of motif in Background | 33.2 +/- 12.4bp |
Strand Bias (log2 ratio + to - strand density) | -1.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
YY2/MA0748.1/Jaspar
Match Rank: | 1 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CKCCATSMACTTK GTCCGCCATTA----- |
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NKX2-8/MA0673.1/Jaspar
Match Rank: | 2 |
Score: | 0.57 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CKCCATSMACTTK-- ------CCACTTGAA |
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NKX2-3/MA0672.1/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CKCCATSMACTTK-- -----ACCACTTGAA |
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PH0171.1_Nkx2-1/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CKCCATSMACTTK----- --TAAGCCACTTGAAATT |
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PB0146.1_Mafk_2/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CKCCATSMACTTK---- --CCTTGCAATTTTTNN |
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Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CKCCATSMACTTK GGCCATTAAC--- |
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PH0115.1_Nkx2-6/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CKCCATSMACTTK----- --TAAGCCACTTAACATT |
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PH0114.1_Nkx2-5/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CKCCATSMACTTK----- --TAAGCCACTTGAATTT |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CKCCATSMACTTK- ----MRSCACTYAA |
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Vdr/MA0693.1/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CKCCATSMACTTK TGAACTCNATGAACTC- |
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