Information for 25-CCGTCTATCCCGC (Motif 40)

A G T C A G T C A C T G A C G T A G T C A C G T C G T A A C G T A G T C A G T C A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A C T G A C T G
p-value:1e-3
log p-value:-8.788e+00
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.0 +/- 27.2bp
Average Position of motif in Background72.2 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CCGTCTATCCCGC-
----NYTTCCCGCC
 A G T C A G T C A C T G A C G T A G T C A C G T C G T A A C G T A G T C A G T C A G T C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

E2F4/MA0470.1/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CCGTCTATCCCGC--
----NNTTCCCGCCC
 A G T C A G T C A C T G A C G T A G T C A C G T C G T A A C G T A G T C A G T C A G T C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:3
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CCGTCTATCCCGC----
-----TTTCCCGCCMAV
 A G T C A G T C A C T G A C G T A G T C A C G T C G T A A C G T A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CCGTCTATCCCGC--
----NCTTCCCGCCC
 A G T C A G T C A C T G A C G T A G T C A C G T C G T A A C G T A G T C A G T C A G T C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CCGTCTATCCCGC-
----DTTTCCCGCC
 A G T C A G T C A C T G A C G T A G T C A C G T C G T A A C G T A G T C A G T C A G T C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCGTCTATCCCGC--
---VDTTTCCCGCCA
 A G T C A G T C A C T G A C G T A G T C A C G T C G T A A C G T A G T C A G T C A G T C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CCGTCTATCCCGC---
------TTCCCGCCWG
 A G T C A G T C A C T G A C G T A G T C A C G T C G T A A C G T A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

E2F8/MA0865.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CCGTCTATCCCGC----
-----TTTCCCGCCAAA
 A G T C A G T C A C T G A C G T A G T C A C G T C G T A A C G T A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CCGTCTATCCCGC-------
---TACGCCCCGCCACTCTG
 A G T C A G T C A C T G A C G T A G T C A C G T C G T A A C G T A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CCGTCTATCCCGC---
----TTTTCGCGCGAA
 A G T C A G T C A C T G A C G T A G T C A C G T C G T A A C G T A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A