Motif 4

Information for 3-TGGGCCCGCTCCG (Motif 4)

Reverse Opposite:

p-value:	1e-15
log p-value:	-3.467e+01
Information Content per bp:	1.787
Number of Target Sequences with motif	8.0
Percentage of Target Sequences with motif	0.89%
Number of Background Sequences with motif	1.8
Percentage of Background Sequences with motif	0.01%
Average Position of motif in Targets	47.5 +/- 21.5bp
Average Position of motif in Background	66.1 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)	0.7
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:	1
Score:	0.72
Offset:	7
Orientation:	forward strand
Alignment:	TGGGCCCGCTCCG -------GCTCCG

Sp1(Zf)/Promoter/Homer

Match Rank:	2
Score:	0.69
Offset:	1
Orientation:	forward strand
Alignment:	TGGGCCCGCTCCG -GGCCCCGCCCCC

POL011.1_XCPE1/Jaspar

Match Rank:	3
Score:	0.63
Offset:	1
Orientation:	reverse strand
Alignment:	TGGGCCCGCTCCG -GGTCCCGCCC--

SP2/MA0516.1/Jaspar

Match Rank:	4
Score:	0.60
Offset:	2
Orientation:	forward strand
Alignment:	TGGGCCCGCTCCG---- --GCCCCGCCCCCTCCC

POL006.1_BREu/Jaspar

Match Rank:	5
Score:	0.60
Offset:	2
Orientation:	reverse strand
Alignment:	TGGGCCCGCTCCG --GGCGCGCT---

PB0076.1_Sp4_1/Jaspar

Match Rank:	6
Score:	0.57
Offset:	1
Orientation:	forward strand
Alignment:	TGGGCCCGCTCCG----- -GGTCCCGCCCCCTTCTC

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:	7
Score:	0.57
Offset:	1
Orientation:	reverse strand
Alignment:	TGGGCCCGCTCCG -GGCCACRCCCMK

SP1/MA0079.3/Jaspar

Match Rank:	8
Score:	0.57
Offset:	2
Orientation:	forward strand
Alignment:	TGGGCCCGCTCCG --GCCCCGCCCCC

PB0095.1_Zfp161_1/Jaspar

Match Rank:	9
Score:	0.56
Offset:	-1
Orientation:	forward strand
Alignment:	-TGGGCCCGCTCCG-- TGGCGCGCGCGCCTGA

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:	10
Score:	0.55
Offset:	4
Orientation:	reverse strand
Alignment:	TGGGCCCGCTCCG ----CCCCCCCC-