Information for 14-CGCCCDTGTCGCC (Motif 30)

A G T C A C T G A G T C A G T C G T A C C G T A A C G T A T C G A G C T A G T C C T A G A G T C A G T C
Reverse Opposite:
C T A G C T A G A G T C A C T G C T G A A T G C C G T A G A C T A C T G A C T G A C T G G T A C A C T G
p-value:1e-8
log p-value:-2.001e+01
Information Content per bp:1.842
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets62.9 +/- 16.6bp
Average Position of motif in Background51.1 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGCCCDTGTCGCC--
GAGCCCTTGTCCCTAA
 A C G T A G T C A C T G A G T C A G T C G T A C C G T A A C G T A T C G A G C T A G T C C T A G A G T C A G T C A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------CGCCCDTGTCGCC
TACGCCCCGCCACTCTG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C G T A C C G T A A C G T A T C G A G C T A G T C C T A G A G T C A G T C
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGCCCDTGTCGCC
--CCTTTGTT---
 A G T C A C T G A G T C A G T C G T A C C G T A A C G T A T C G A G C T A G T C C T A G A G T C A G T C
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:4
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------CGCCCDTGTCGCC
AAGCATACGCCCAACTT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C G T A C C G T A A C G T A T C G A G C T A G T C C T A G A G T C A G T C
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T A C G T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGCCCDTGTCGCC-
-GCACGTGTCNNNN
 A G T C A C T G A G T C A G T C G T A C C G T A A C G T A T C G A G C T A G T C C T A G A G T C A G T C A C G T
A C G T A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------CGCCCDTGTCGCC
TCGACCCCGCCCCTAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C G T A C C G T A A C G T A T C G A G C T A G T C C T A G A G T C A G T C
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T A C G T A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CGCCCDTGTCGCC
GTCCGCCATTA-----
 A C G T A C G T A C G T A G T C A C T G A G T C A G T C G T A C C G T A A C G T A T C G A G C T A G T C C T A G A G T C A G T C
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CGCCCDTGTCGCC-----
-NNNNTTGGCGCCGANNN
 A G T C A C T G A G T C A G T C G T A C C G T A A C G T A T C G A G C T A G T C C T A G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CGCCCDTGTCGCC
AGCGCGCC---------
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C G T A C C G T A A C G T A T C G A G C T A G T C C T A G A G T C A G T C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CGCCCDTGTCGCC
--CCWTTGTY---
 A G T C A C T G A G T C A G T C G T A C C G T A A C G T A T C G A G C T A G T C C T A G A G T C A G T C
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T