Information for 13-CGGCCCCGCAGCCAGA (Motif 29)

A T G C C T A G A C T G A G T C A T G C T A G C A T G C A C T G A T G C G T C A A C T G A G T C A T G C T C G A A C T G T G C A
Reverse Opposite:
A C G T A G T C A G C T A T C G A C T G A G T C A C G T A T C G A G T C A T C G A T C G A T C G A C T G A G T C A G T C A T C G
p-value:1e-8
log p-value:-2.052e+01
Information Content per bp:1.801
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.7 +/- 27.3bp
Average Position of motif in Background78.6 +/- 5.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGGCCCCGCAGCCAGA
-GGCCCCGCCCCC---
 A T G C C T A G A C T G A G T C A T G C T A G C A T G C A C T G A T G C G T C A A C T G A G T C A T G C T C G A A C T G T G C A
A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGGCCCCGCAGCCAGA
--GCCGCGCAGTGCGT
 A T G C C T A G A C T G A G T C A T G C T A G C A T G C A C T G A T G C G T C A A C T G A G T C A T G C T C G A A C T G T G C A
A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CGGCCCCGCAGCCAGA--
---CCACACAGCAGGAGA
 A T G C C T A G A C T G A G T C A T G C T A G C A T G C A C T G A T G C G T C A A C T G A G T C A T G C T C G A A C T G T G C A A C G T A C G T
A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CGGCCCCGCAGCCAGA
------CGGAGC----
 A T G C C T A G A C T G A G T C A T G C T A G C A T G C A C T G A T G C G T C A A C T G A G T C A T G C T C G A A C T G T G C A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CGGCCCCGCAGCCAGA--
---CCACACAGCAGGAGA
 A T G C C T A G A C T G A G T C A T G C T A G C A T G C A C T G A T G C G T C A A C T G A G T C A T G C T C G A A C T G T G C A A C G T A C G T
A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CGGCCCCGCAGCCAGA
--GCCCCGCCCCC---
 A T G C C T A G A C T G A G T C A T G C T A G C A T G C A C T G A T G C G T C A A C T G A G T C A T G C T C G A A C T G T G C A
A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCCCGCAGCCAGA
CAGGCCNNGGCCNN---
 A C G T A T G C C T A G A C T G A G T C A T G C T A G C A T G C A C T G A T G C G T C A A C T G A G T C A T G C T C G A A C T G T G C A
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CGGCCCCGCAGCCAGA
NAGCCCCGCCCCCN--
 A T G C C T A G A C T G A G T C A T G C T A G C A T G C A C T G A T G C G T C A A C T G A G T C A T G C T C G A A C T G T G C A
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CGGCCCCGCAGCCAGA--
---GAGCACAGCAGGACA
 A T G C C T A G A C T G A G T C A T G C T A G C A T G C A C T G A T G C G T C A A C T G A G T C A T G C T C G A A C T G T G C A A C G T A C G T
A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

SP2/MA0516.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CGGCCCCGCAGCCAGA-
--GCCCCGCCCCCTCCC
 A T G C C T A G A C T G A G T C A T G C T A G C A T G C A C T G A T G C G T C A A C T G A G T C A T G C T C G A A C T G T G C A A C G T
A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C