Information for 12-RCGCGCACGMSYC (Motif 27)

C T G A A G T C C T A G A G T C A C T G A T G C C G T A A G T C A C T G G T C A A T G C A G C T A G T C
Reverse Opposite:
A C T G C T G A A T C G A C G T A G T C A C T G A C G T A T C G A G T C A C T G A G T C A C T G A G C T
p-value:1e-8
log p-value:-2.052e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.3 +/- 13.7bp
Average Position of motif in Background67.6 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:RCGCGCACGMSYC
-TGCGCAGGCGC-
 C T G A A G T C C T A G A G T C A C T G A T G C C G T A A G T C A C T G G T C A A T G C A G C T A G T C
A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T

EGR2/MA0472.2/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:RCGCGCACGMSYC
ACGCCCACGCA--
 C T G A A G T C C T A G A G T C A C T G A T G C C G T A A G T C A C T G G T C A A T G C A G C T A G T C
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:RCGCGCACGMSYC
---GGCACGCGTC
 C T G A A G T C C T A G A G T C A C T G A T G C C G T A A G T C A C T G G T C A A T G C A G C T A G T C
A C G T A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----RCGCGCACGMSYC
NCANGCGCGCGCGCCA-
 A C G T A C G T A C G T A C G T C T G A A G T C C T A G A G T C A C T G A T G C C G T A A G T C A C T G G T C A A T G C A G C T A G T C
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A A C G T

EGR3/MA0732.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--RCGCGCACGMSYC
CTACGCCCACGCACT
 A C G T A C G T C T G A A G T C C T A G A G T C A C T G A T G C C G T A A G T C A C T G G T C A A T G C A G C T A G T C
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-RCGCGCACGMSYC
YCCGCCCACGCN--
 A C G T C T G A A G T C C T A G A G T C A C T G A T G C C G T A A G T C A C T G G T C A A T G C A G C T A G T C
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---RCGCGCACGMSYC
NNTTTGCACACGGCCC
 A C G T A C G T A C G T C T G A A G T C C T A G A G T C A C T G A T G C C G T A A G T C A C T G G T C A A T G C A G C T A G T C
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

EGR4/MA0733.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--RCGCGCACGMSYC-
TTACGCCCACGCATTT
 A C G T A C G T C T G A A G T C C T A G A G T C A C T G A T G C C G T A A G T C A C T G G T C A A T G C A G C T A G T C A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

HEY2/MA0649.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:RCGCGCACGMSYC
---GGCACGTGNC
 C T G A A G T C C T A G A G T C A C T G A T G C C G T A A G T C A C T G G T C A A T G C A G C T A G T C
A C G T A C G T A C G T A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C

HINFP/MA0131.2/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:RCGCGCACGMSYC
NCGCGGACGTTG-
 C T G A A G T C C T A G A G T C A C T G A T G C C G T A A G T C A C T G G T C A A T G C A G C T A G T C
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T