Information for 8-GCGCTCAGCGACC (Motif 19)

A T C G A G T C A T C G A G T C A C G T A G T C C G T A A T C G G T A C A T C G C T G A A G T C T A G C
Reverse Opposite:
A C T G C T A G A G C T A T G C A C T G A T G C C G A T A C T G G T C A A C T G A T G C A C T G A T G C
p-value:1e-10
log p-value:-2.372e+01
Information Content per bp:1.807
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets51.5 +/- 25.4bp
Average Position of motif in Background72.6 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCGCTCAGCGACC
GCCGCGCAGTGCGT
 A C G T A T C G A G T C A T C G A G T C A C G T A G T C C G T A A T C G G T A C A T C G C T G A A G T C T A G C
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

ZBTB7A/MA0750.1/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCGCTCAGCGACC
GGCGACCACCGA--
 A C G T A T C G A G T C A T C G A G T C A C G T A G T C C G T A A T C G G T A C A T C G C T G A A G T C T A G C
A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCGCTCAGCGACC--
CCGCATAGCAACGGA
 A T C G A G T C A T C G A G T C A C G T A G T C C G T A A T C G G T A C A T C G C T G A A G T C T A G C A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GCGCTCAGCGACC
ATAAAGGCGCGCGAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A T C G A G T C A C G T A G T C C G T A A T C G G T A C A T C G C T G A A G T C T A G C
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GCGCTCAGCGACC
TGGCGCGCGCGCCTGA-
 A C G T A C G T A C G T A C G T A T C G A G T C A T C G A G T C A C G T A G T C C G T A A T C G G T A C A T C G C T G A A G T C T A G C
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GCGCTCAGCGACC
AGCCACTCAAG----
 A C G T A C G T A T C G A G T C A T C G A G T C A C G T A G T C C G T A A T C G G T A C A T C G C T G A A G T C T A G C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GCGCTCAGCGACC---
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C G T A T C G A G T C A T C G A G T C A C G T A G T C C G T A A T C G G T A C A T C G C T G A A G T C T A G C A C G T A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GCGCTCAGCGACC-
NAGGTCANTGACCT
 A T C G A G T C A T C G A G T C A C G T A G T C C G T A A T C G G T A C A T C G C T G A A G T C T A G C A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------GCGCTCAGCGACC
ATAAGGGCGCGCGAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A T C G A G T C A C G T A G T C C G T A A T C G G T A C A T C G C T G A A G T C T A G C
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T A C G T A C G T A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCGCTCAGCGACC
GCGACCACCGAA-
 A T C G A G T C A T C G A G T C A C G T A G T C C G T A A T C G G T A C A T C G C T G A A G T C T A G C
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A A C G T