Information for 6-SKAAAATCGC (Motif 18)

A T C G A C T G C G T A C G T A C T G A C G T A A C G T A G T C C T A G A G T C
Reverse Opposite:
A C T G A G T C A C T G C G T A A C G T A G C T A C G T A C G T G T A C A T G C
p-value:1e-10
log p-value:-2.372e+01
Information Content per bp:1.898
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets37.4 +/- 19.3bp
Average Position of motif in Background48.9 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-SKAAAATCGC----
GAAAAAATTGCAAGG
 A C G T A T C G A C T G C G T A C G T A C T G A C G T A A C G T A G T C C T A G A G T C A C G T A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:SKAAAATCGC---
-CAAGATGGCGGC
 A T C G A C T G C G T A C G T A C T G A C G T A A C G T A G T C C T A G A G T C A C G T A C G T A C G T
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:SKAAAATCGC--
--CAAATCACTG
 A T C G A C T G C G T A C G T A C T G A C G T A A C G T A G T C C T A G A G T C A C G T A C G T
A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:SKAAAATCGC
GGAAATTCCC
 A T C G A C T G C G T A C G T A C T G A C G T A A C G T A G T C C T A G A G T C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

PB0136.1_IRC900814_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--SKAAAATCGC----
ATGGAAAGTCGTAAAA
 A C G T A C G T A T C G A C T G C G T A C G T A C T G A C G T A A C G T A G T C C T A G A G T C A C G T A C G T A C G T A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-SKAAAATCGC
TGGAAAA----
 A C G T A T C G A C T G C G T A C G T A C T G A C G T A A C G T A G T C C T A G A G T C
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:SKAAAATCGC
GGAAATTCCC
 A T C G A C T G C G T A C G T A C T G A C G T A A C G T A G T C C T A G A G T C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---SKAAAATCGC
AATGGAAAAT---
 A C G T A C G T A C G T A T C G A C T G C G T A C G T A C T G A C G T A A C G T A G T C C T A G A G T C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T

ONECUT1/MA0679.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:SKAAAATCGC----
AAAAAATCGATAAT
 A T C G A C T G C G T A C G T A C T G A C G T A A C G T A G T C C T A G A G T C A C G T A C G T A C G T A C G T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---SKAAAATCGC
NATGGAAAAN---
 A C G T A C G T A C G T A T C G A C T G C G T A C G T A C T G A C G T A A C G T A G T C C T A G A G T C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T