Information for 3-CGGCCTCGAGCAG (Motif 6)

A G T C C T A G A C T G A G T C A T G C A G C T A G T C A C T G C G T A A C T G A G T C C T G A A T C G
Reverse Opposite:
A T G C A G C T A C T G A G T C A C G T A G T C A C T G C T G A A T C G A C T G A G T C A G T C A C T G
p-value:1e-10
log p-value:-2.444e+01
Information Content per bp:1.905
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 26.9bp
Average Position of motif in Background40.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGGCCTCGAGCAG
AGGCCTAG-----
 A G T C C T A G A C T G A G T C A T G C A G C T A G T C A C T G C G T A A C T G A G T C C T G A A T C G
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGGCCTCGAGCAG
-CGCCTCAGGCA-
 A G T C C T A G A C T G A G T C A T G C A G C T A G T C A C T G C G T A A C T G A G T C C T G A A T C G
A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGGCCTCGAGCAG
-AGCCTCAGGCA-
 A G T C C T A G A C T G A G T C A T G C A G C T A G T C A C T G C G T A A C T G A G T C C T G A A T C G
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGGCCTCGAGCAG
-TGCCTGAGGCN-
 A G T C C T A G A C T G A G T C A T G C A G C T A G T C A C T G C G T A A C T G A G T C C T G A A T C G
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

Tcfl5/MA0632.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGGCCTCGAGCAG
--GGCACGTGCC-
 A G T C C T A G A C T G A G T C A T G C A G C T A G T C A C T G C G T A A C T G A G T C C T G A A T C G
A C G T A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CGGCCTCGAGCAG
GCTCGGSCTC------
 A C G T A C G T A C G T A G T C C T A G A C T G A G T C A T G C A G C T A G T C A C T G C G T A A C T G A G T C C T G A A T C G
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGGCCTCGAGCAG
GRTGMTRGAGCC-
 A G T C C T A G A C T G A G T C A T G C A G C T A G T C A C T G C G T A A C T G A G T C C T G A A T C G
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------CGGCCTCGAGCAG
GGGGCCGAGGCCTG------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T A G A C T G A G T C A T G C A G C T A G T C A C T G C G T A A C T G A G T C C T G A A T C G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCTCGAGCAG-
NTNGCCTCAGGCNNN
 A C G T A G T C C T A G A C T G A G T C A T G C A G C T A G T C A C T G C G T A A C T G A G T C C T G A A T C G A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CGGCCTCGAGCAG
AGGCCTNG-----
 A G T C C T A G A C T G A G T C A T G C A G C T A G T C A C T G C G T A A C T G A G T C C T G A A T C G
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T