Information for 3-CACGGCTCAT (Motif 11)

A G T C C T G A T G A C C T A G A C T G A G T C A G C T G T A C G T C A A C G T
Reverse Opposite:
T G C A A C G T A C T G C T G A A C T G A G T C A G T C A C T G A G C T A C T G
p-value:1e-8
log p-value:-2.034e+01
Information Content per bp:1.851
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif80.2
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets45.1 +/- 25.5bp
Average Position of motif in Background46.4 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFE2/MA0841.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CACGGCTCAT-
CATGACTCATC
 A G T C C T G A T G A C C T A G A C T G A G T C A G C T G T A C G T C A A C G T A C G T
T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CACGGCTCAT
--NGGATTAN
 A G T C C T G A T G A C C T A G A C T G A G T C A G C T G T A C G T C A A C G T
A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CACGGCTCAT---
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A G T C C T G A T G A C C T A G A C T G A G T C A G C T G T A C G T C A A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

JDP2/MA0655.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CACGGCTCAT
-ATGACTCAT
 A G T C C T G A T G A C C T A G A C T G A G T C A G C T G T A C G T C A A C G T
A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T

PH0098.1_Lhx8/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CACGGCTCAT-------
CACCGCTAATTAGNNGN
 A G T C C T G A T G A C C T A G A C T G A G T C A G C T G T A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CACGGCTCAT
---NGCTN--
 A G T C C T G A T G A C C T A G A C T G A G T C A G C T G T A C G T C A A C G T
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CACGGCTCAT---
---AGCTCATTAT
 A G T C C T G A T G A C C T A G A C T G A G T C A G C T G T A C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

MTF1/MA0863.1/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CACGGCTCAT
TTTGCACACGGCAC--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A T G A C C T A G A C T G A G T C A G C T G T A C G T C A A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CACGGCTCAT
GCACGTNC---
 A C G T A G T C C T G A T G A C C T A G A C T G A G T C A G C T G T A C G T C A A C G T
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CACGGCTCAT----
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A G T C C T G A T G A C C T A G A C T G A G T C A G C T G T A C G T C A A C G T A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C