Information for 9-TAGCCCTKTCCAGCTT (Motif 25)

A G C T C T G A A C T G T A G C A G T C A T G C A C G T A C G T G A C T A G T C A G T C C G T A A T C G A G T C A C G T A G C T
Reverse Opposite:
T C G A C G T A A C T G T A G C C G A T A C T G A C T G C T G A G T C A C G T A A T C G C T A G A C T G A G T C A G C T T C G A
p-value:1e-7
log p-value:-1.720e+01
Information Content per bp:1.766
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets53.9 +/- 29.9bp
Average Position of motif in Background51.1 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TAGCCCTKTCCAGCTT
CNAGGCCT---------
 A C G T A G C T C T G A A C T G T A G C A G T C A T G C A C G T A C G T G A C T A G T C A G T C C G T A A T C G A G T C A C G T A G C T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TAGCCCTKTCCAGCTT
-KGCCCTTCCCCA---
 A G C T C T G A A C T G T A G C A G T C A T G C A C G T A C G T G A C T A G T C A G T C C G T A A T C G A G T C A C G T A G C T
A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TAGCCCTKTCCAGCTT
CTAGGCCT---------
 A C G T A G C T C T G A A C T G T A G C A G T C A T G C A C G T A C G T G A C T A G T C A G T C C G T A A T C G A G T C A C G T A G C T
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TAGCCCTKTCCAGCTT
------TTMACACCTT
 A G C T C T G A A C T G T A G C A G T C A T G C A C G T A C G T G A C T A G T C A G T C C G T A A T C G A G T C A C G T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

Rarb/MA0857.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TAGCCCTKTCCAGCTT-
-TGACCTTTTGACCTTT
 A G C T C T G A A C T G T A G C A G T C A T G C A C G T A C G T G A C T A G T C A G T C C G T A A T C G A G T C A C G T A G C T A C G T
A C G T G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

TBX20/MA0689.1/Jaspar

Match Rank:6
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TAGCCCTKTCCAGCTT
-----CTTCACACCTA
 A G C T C T G A A C T G T A G C A G T C A T G C A C G T A C G T G A C T A G T C A G T C C G T A A T C G A G T C A C G T A G C T
A C G T A C G T A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:TAGCCCTKTCCAGCTT
------TGCCCAGNHW
 A G C T C T G A A C T G T A G C A G T C A T G C A C G T A C G T G A C T A G T C A G T C C G T A A T C G A G T C A C G T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

RARA/MA0729.1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TAGCCCTKTCCAGCTT
CATTGACCTTTTGACCTC
 A C G T A C G T A G C T C T G A A C T G T A G C A G T C A T G C A C G T A C G T G A C T A G T C A G T C C G T A A T C G A G T C A C G T A G C T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:9
Score:0.50
Offset:5
Orientation:forward strand
Alignment:TAGCCCTKTCCAGCTT
-----ATTAACACCT-
 A G C T C T G A A C T G T A G C A G T C A T G C A C G T A C G T G A C T A G T C A G T C C G T A A T C G A G T C A C G T A G C T
A C G T A C G T A C G T A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:TAGCCCTKTCCAGCTT---
---------CCAGCTGTTN
 A G C T C T G A A C T G T A G C A G T C A T G C A C G T A C G T G A C T A G T C A G T C C G T A A T C G A G T C A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A