Information for 20-GGCTGTCGCTGGG (Motif 23)

A C T G A C T G A G T C A C G T A C T G A C G T A G T C A T C G A G T C A C G T A C T G C T A G A C T G
Reverse Opposite:
G T A C G A T C A G T C C G T A A C T G T A G C C T A G C G T A A G T C C G T A A C T G A G T C A G T C
p-value:1e-8
log p-value:-1.953e+01
Information Content per bp:1.900
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.3 +/- 20.6bp
Average Position of motif in Background53.9 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GGCTGTCGCTGGG
--CTGTTCCTGG-
 A C T G A C T G A G T C A C G T A C T G A C G T A G T C A T C G A G T C A C G T A C T G C T A G A C T G
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GGCTGTCGCTGGG-
--CTGTTGCTAGGS
 A C T G A C T G A G T C A C G T A C T G A C G T A G T C A T C G A G T C A C G T A C T G C T A G A C T G A C G T
A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GGCTGTCGCTGGG
GGNGCGNCTGTTNNN---
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C G T A G T C A T C G A G T C A C G T A C T G C T A G A C T G
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGCTGTCGCTGGG
-GCTGTG------
 A C T G A C T G A G T C A C G T A C T G A C G T A G T C A T C G A G T C A C G T A C T G C T A G A C T G
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGCTGTCGCTGGG
GSCTGTCACTCA-
 A C T G A C T G A G T C A C G T A C T G A C G T A G T C A T C G A G T C A C G T A C T G C T A G A C T G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCTGTCGCTGGG
NGCTN--------
 A C T G A C T G A G T C A C G T A C T G A C G T A G T C A T C G A G T C A C G T A C T G C T A G A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GGCTGTCGCTGGG--
-----WDNCTGGGCA
 A C T G A C T G A G T C A C G T A C T G A C G T A G T C A T C G A G T C A C G T A C T G C T A G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGCTGTCGCTGGG-----
---KGTTGCTAGGMAACA
 A C T G A C T G A G T C A C G T A C T G A C G T A G T C A T C G A G T C A C G T A C T G C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGCTGTCGCTGGG
NTGGGTGTGGCC---
 A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C G T A G T C A T C G A G T C A C G T A C T G C T A G A C T G
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGTCGCTGGG
TGGGTGTGGC----
 A C G T A C T G A C T G A G T C A C G T A C T G A C G T A G T C A T C G A G T C A C G T A C T G C T A G A C T G
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T