Information for 2-TKCCGGGARTTGTAGT (Motif 2)

A G C T A C T G T A G C A G T C A C T G A C T G A C T G C T G A T C A G G C A T A G C T A C T G A C G T T C G A A C T G A C G T
Reverse Opposite:
C G T A A G T C A G C T T C G A A G T C T C G A C G T A A G T C G A C T A G T C G T A C A G T C C T A G A T C G T G A C T C G A
p-value:1e-18
log p-value:-4.230e+01
Information Content per bp:1.697
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.14%
Number of Background Sequences with motif78.5
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets52.2 +/- 28.2bp
Average Position of motif in Background48.1 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:1
Score:0.90
Offset:-3
Orientation:reverse strand
Alignment:---TKCCGGGARTTGTAGT-
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A G C T A C T G T A G C A G T C A C T G A C T G A C T G C T G A T C A G G C A T A G C T A C T G A C G T T C G A A C T G A C G T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY(?)/Promoter/Homer

Match Rank:2
Score:0.90
Offset:4
Orientation:reverse strand
Alignment:TKCCGGGARTTGTAGT
----GGGAATTGTAGT
 A G C T A C T G T A G C A G T C A C T G A C T G A C T G C T G A T C A G G C A T A G C T A C T G A C G T T C G A A C T G A C G T
A C G T A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.86
Offset:-3
Orientation:reverse strand
Alignment:---TKCCGGGARTTGTAGT-
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A G C T A C T G T A G C A G T C A C T G A C T G A C T G C T G A T C A G G C A T A G C T A C T G A C G T T C G A A C T G A C G T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TKCCGGGARTTGTAGT
RGSMTBCTGGGAAAT-----
 A C G T A C G T A C G T A C G T A G C T A C T G T A G C A G T C A C T G A C T G A C T G C T G A T C A G G C A T A G C T A C T G A C G T T C G A A C T G A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TKCCGGGARTTGTAGT
CTTCTGGGAAA------
 A C G T A G C T A C T G T A G C A G T C A C T G A C T G A C T G C T G A T C A G G C A T A G C T A C T G A C G T T C G A A C T G A C G T
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TKCCGGGARTTGTAGT
TTTCCAGGAAA------
 A C G T A G C T A C T G T A G C A G T C A C T G A C T G A C T G C T G A T C A G G C A T A G C T A C T G A C G T T C G A A C T G A C G T
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TKCCGGGARTTGTAGT
CTTCCNGGAA-------
 A C G T A G C T A C T G T A G C A G T C A C T G A C T G A C T G C T G A T C A G G C A T A G C T A C T G A C G T T C G A A C T G A C G T
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TKCCGGGARTTGTAGT
TGGCGGGAAAHB----
 A G C T A C T G T A G C A G T C A C T G A C T G A C T G C T G A T C A G G C A T A G C T A C T G A C G T T C G A A C T G A C G T
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TKCCGGGARTTGTAGT
TTTCCAGGAAATGG---
 A C G T A G C T A C T G T A G C A G T C A C T G A C T G A C T G C T G A T C A G G C A T A G C T A C T G A C G T T C G A A C T G A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TKCCGGGARTTGTAGT
TTCTTGGAAAN-----
 A G C T A C T G T A G C A G T C A C T G A C T G A C T G C T G A T C A G G C A T A G C T A C T G A C G T T C G A A C T G A C G T
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T A C G T A C G T A C G T