Information for 18-CGCCAGGHCCCGA (Motif 19)

A G T C A C T G A G T C A G T C C G T A A T C G A C T G G A C T A G T C A T G C T A G C A T C G G T C A
Reverse Opposite:
A C G T A T G C A C T G A T C G A C T G C G T A A G T C A T G C A C G T C T A G A C T G G T A C A C T G
p-value:1e-9
log p-value:-2.231e+01
Information Content per bp:1.830
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets32.7 +/- 20.7bp
Average Position of motif in Background71.7 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGCCAGGHCCCGA
--CTAGGCCT---
 A G T C A C T G A G T C A G T C C G T A A T C G A C T G G A C T A G T C A T G C T A G C A T C G G T C A
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGCCAGGHCCCGA----
---CAGGCCNNGGCCNN
 A G T C A C T G A G T C A G T C C G T A A T C G A C T G G A C T A G T C A T G C T A G C A T C G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGCCAGGHCCCGA
--CNAGGCCT---
 A G T C A C T G A G T C A G T C C G T A A T C G A C T G G A C T A G T C A T G C T A G C A T C G G T C A
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGCCAGGHCCCGA
--CAAGGHCANV-
 A G T C A C T G A G T C A G T C C G T A A T C G A C T G G A C T A G T C A T G C T A G C A T C G G T C A
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

CREB3L1/MA0839.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGCCAGGHCCCGA
ATGCCACGTCATCA
 A C G T A G T C A C T G A G T C A G T C C G T A A T C G A C T G G A C T A G T C A T G C T A G C A T C G G T C A
T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

SP4/MA0685.1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGCCAGGHCCCGA--
TAAGCCACGCCCCCTTT
 A C G T A C G T A G T C A C T G A G T C A G T C C G T A A T C G A C T G G A C T A G T C A T G C T A G C A T C G G T C A A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

KLF16/MA0741.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CGCCAGGHCCCGA
-GCCACGCCCCC-
 A G T C A C T G A G T C A G T C C G T A A T C G A C T G G A C T A G T C A T G C T A G C A T C G G T C A
A C G T T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGCCAGGHCCCGA
TGCCAA-------
 A G T C A C T G A G T C A G T C C G T A A T C G A C T G G A C T A G T C A T G C T A G C A T C G G T C A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CGCCAGGHCCCGA
GGCTCYAKCAYC---
 A C G T A C G T A G T C A C T G A G T C A G T C C G T A A T C G A C T G G A C T A G T C A T G C T A G C A T C G G T C A
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CGCCAGGHCCCGA
NTCAAGGTCA---
 A G T C A C T G A G T C A G T C C G T A A T C G A C T G G A C T A G T C A T G C T A G C A T C G G T C A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T