Information for 18-AGAGGAGAGC (Motif 37)

C G T A A C T G C G T A A C T G C T A G C G T A A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C C G A T G T A C A C G T A G T C A G T C C G A T A G T C C G A T
p-value:1e-6
log p-value:-1.490e+01
Information Content per bp:1.866
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif74.1
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets53.1 +/- 22.1bp
Average Position of motif in Background46.3 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGAGGAGAGC
-GTGGAT---
 C G T A A C T G C G T A A C T G C T A G C G T A A C T G C G T A A C T G A G T C
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AGAGGAGAGC-
------CAGCC
 C G T A A C T G C G T A A C T G C T A G C G T A A C T G C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

SPIB/MA0081.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGAGGAGAGC
AGAGGAA---
 C G T A A C T G C G T A A C T G C T A G C G T A A C T G C G T A A C T G A G T C
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGAGGAGAGC-
-BTBRAGTGSN
 C G T A A C T G C G T A A C T G C T A G C G T A A C T G C G T A A C T G A G T C A C G T
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGAGGAGAGC--
--TTGAGTGSTT
 C G T A A C T G C G T A A C T G C T A G C G T A A C T G C G T A A C T G A G T C A C G T A C G T
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGAGGAGAGC
TGGGGA----
 C G T A A C T G C G T A A C T G C T A G C G T A A C T G C G T A A C T G A G T C
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGAGGAGAGC-
-CTYRAGTGSY
 C G T A A C T G C G T A A C T G C T A G C G T A A C T G C G T A A C T G A G T C A C G T
A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

GATA3/MA0037.2/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGAGGAGAGC
AGATAAGA--
 C G T A A C T G C G T A A C T G C T A G C G T A A C T G C G T A A C T G A G T C
C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGAGGAGAGC
GGGAGGACNG-
 A C G T C G T A A C T G C G T A A C T G C T A G C G T A A C T G C G T A A C T G A G T C
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:AGAGGAGAGC--
-CTTGAGTGGCT
 C G T A A C T G C G T A A C T G C T A G C G T A A C T G C G T A A C T G A G T C A C G T A C G T
A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T