Information for 19-CCTCCTACAAATA (Motif 32)

A G T C A G T C A C G T A G T C A G T C A C G T C G T A A G T C C G T A G T C A C G T A A C G T C T G A
Reverse Opposite:
A G C T C G T A A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C T G C G T A A C T G C T A G
p-value:1e-8
log p-value:-1.990e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.2 +/- 10.3bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2A/MA0052.3/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCTCCTACAAATA--
---TCTAAAAATAGA
 A G T C A G T C A C G T A G T C A G T C A C G T C G T A A G T C C G T A G T C A C G T A A C G T C T G A A C G T A C G T
A C G T A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CCTCCTACAAATA--
---ACTATAAATAGA
 A G T C A G T C A C G T A G T C A G T C A C G T C G T A A G T C C G T A G T C A C G T A A C G T C T G A A C G T A C G T
A C G T A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

MEF2B/MA0660.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCTCCTACAAATA--
---GCTATAAATAGC
 A G T C A G T C A C G T A G T C A G T C A C G T C G T A A G T C C G T A G T C A C G T A A C G T C T G A A C G T A C G T
A C G T A C G T A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCTCCTACAAATA
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A G T C A G T C A C G T A G T C A G T C A C G T C G T A A G T C C G T A G T C A C G T A A C G T C T G A
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CCTCCTACAAATA-
----CCAAAAATAG
 A G T C A G T C A C G T A G T C A G T C A C G T C G T A A G T C C G T A G T C A C G T A A C G T C T G A A C G T
A C G T A C G T A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

PH0048.1_Hoxa13/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCTCCTACAAATA
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A G T C A G T C A C G T A G T C A G T C A C G T C G T A A G T C C G T A G T C A C G T A A C G T C T G A
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCTCCTACAAATA--
---GCTAAAAATAGC
 A G T C A G T C A C G T A G T C A G T C A C G T C G T A A G T C C G T A G T C A C G T A A C G T C T G A A C G T A C G T
A C G T A C G T A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCTCCTACAAATA--
---DCYAAAAATAGM
 A G T C A G T C A C G T A G T C A G T C A C G T C G T A A G T C C G T A G T C A C G T A A C G T C T G A A C G T A C G T
A C G T A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

HOXC13/MA0907.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTCCTACAAATA
GCTCGTAAAAA--
 A G T C A G T C A C G T A G T C A G T C A C G T C G T A A G T C C G T A G T C A C G T A A C G T C T G A
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCTCCTACAAATA--
---KCCAAAAATAGC
 A G T C A G T C A C G T A G T C A G T C A C G T C G T A A G T C C G T A G T C A C G T A A C G T C T G A A C G T A C G T
A C G T A C G T A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C