Information for 12-CTTCATAACWCYCMTA (Motif 12)

G T A C A G C T A C G T G T A C G T C A C G A T T G C A G T C A G A T C C G A T A T G C G A C T T A G C G T C A A G C T C G T A
Reverse Opposite:
A C G T C T G A C A G T A T C G C T G A A T C G G C T A C T A G A C G T A C G T C G T A A C G T A C T G C G T A C T G A A C T G
p-value:1e-12
log p-value:-2.980e+01
Information Content per bp:1.687
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.4 +/- 26.4bp
Average Position of motif in Background42.9 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTTCATAACWCYCMTA
ACATTCATGACACG----
 A C G T A C G T G T A C A G C T A C G T G T A C G T C A C G A T T G C A G T C A G A T C C G A T A T G C G A C T T A G C G T C A A G C T C G T A
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTTCATAACWCYCMTA
GCTTCC-----------
 A C G T G T A C A G C T A C G T G T A C G T C A C G A T T G C A G T C A G A T C C G A T A T G C G A C T T A G C G T C A A G C T C G T A
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CTTCATAACWCYCMTA
GACCACATTCATACAAT-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G C T A C G T G T A C G T C A C G A T T G C A G T C A G A T C C G A T A T G C G A C T T A G C G T C A A G C T C G T A
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTTCATAACWCYCMTA
ATGCATAATTCA----
 G T A C A G C T A C G T G T A C G T C A C G A T T G C A G T C A G A T C C G A T A T G C G A C T T A G C G T C A A G C T C G T A
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T A C G T A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTTCATAACWCYCMTA
TATCATAATTAAGGA-
 G T A C A G C T A C G T G T A C G T C A C G A T T G C A G T C A G A T C C G A T A T G C G A C T T A G C G T C A A G C T C G T A
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTTCATAACWCYCMTA
-GTCATN---------
 G T A C A G C T A C G T G T A C G T C A C G A T T G C A G T C A G A T C C G A T A T G C G A C T T A G C G T C A A G C T C G T A
A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTTCATAACWCYCMTA
GAATATTCAT----------
 A C G T A C G T A C G T A C G T G T A C A G C T A C G T G T A C G T C A C G A T T G C A G T C A G A T C C G A T A T G C G A C T T A G C G T C A A G C T C G T A
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:8
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CTTCATAACWCYCMTA
AATCAATTCAATAATT-----
 A C G T A C G T A C G T A C G T A C G T G T A C A G C T A C G T G T A C G T C A C G A T T G C A G T C A G A T C C G A T A T G C G A C T T A G C G T C A A G C T C G T A
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CTTCATAACWCYCMTA
ACTTCCTGNT-------
 A C G T G T A C A G C T A C G T G T A C G T C A C G A T T G C A G T C A G A T C C G A T A T G C G A C T T A G C G T C A A G C T C G T A
C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CTTCATAACWCYCMTA
NATTCAAAT--------
 A C G T G T A C A G C T A C G T G T A C G T C A C G A T T G C A G T C A G A T C C G A T A T G C G A C T T A G C G T C A A G C T C G T A
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T