Information for 9-ATGCTGRTAACYRGGA (Motif 9)

G T C A A C G T A T C G A G T C C G A T C A T G C T G A A C G T C G T A C T G A A T G C G A T C C T A G A C T G C T A G C G T A
Reverse Opposite:
A C G T A G T C A G T C G A T C C T A G A T C G A G C T G A C T G T C A G A C T G A T C C G T A A C T G A T G C C G T A A C G T
p-value:1e-12
log p-value:-2.952e+01
Information Content per bp:1.734
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif13.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets42.8 +/- 23.1bp
Average Position of motif in Background54.9 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATGCTGRTAACYRGGA
WATGCAAATGAG-----
 A C G T G T C A A C G T A T C G A G T C C G A T C A T G C T G A A C G T C G T A C T G A A T G C G A T C C T A G A C T G C T A G C G T A
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATGCTGRTAACYRGGA
TATGCWAATBAV-----
 A C G T G T C A A C G T A T C G A G T C C G A T C A T G C T G A A C G T C G T A C T G A A T G C G A T C C T A G A C T G C T A G C G T A
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATGCTGRTAACYRGGA
AATATGCAAATTAG-----
 A C G T A C G T A C G T G T C A A C G T A T C G A G T C C G A T C A T G C T G A A C G T C G T A C T G A A T G C G A T C C T A G A C T G C T A G C G T A
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ATGCTGRTAACYRGGA
TTATGCAAATTA------
 A C G T A C G T G T C A A C G T A T C G A G T C C G A T C A T G C T G A A C G T C G T A C T G A A T G C G A T C C T A G A C T G C T A G C G T A
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ATGCTGRTAACYRGGA
TTGTATGCAAATTAGA----
 A C G T A C G T A C G T A C G T G T C A A C G T A T C G A G T C C G A T C A T G C T G A A C G T C G T A C T G A A T G C G A T C C T A G A C T G C T A G C G T A
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ATGCTGRTAACYRGGA
TTGTATGCAAATTAGA----
 A C G T A C G T A C G T A C G T G T C A A C G T A T C G A G T C C G A T C A T G C T G A A C G T C G T A C T G A A T G C G A T C C T A G A C T G C T A G C G T A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ATGCTGRTAACYRGGA
TTGTATGCAAATTAGA----
 A C G T A C G T A C G T A C G T G T C A A C G T A T C G A G T C C G A T C A T G C T G A A C G T C G T A C T G A A T G C G A T C C T A G A C T G C T A G C G T A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ATGCTGRTAACYRGGA
TATGCAAAT--------
 A C G T G T C A A C G T A T C G A G T C C G A T C A T G C T G A A C G T C G T A C T G A A T G C G A T C C T A G A C T G C T A G C G T A
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ATGCTGRTAACYRGGA
TTATGCAAATTA------
 A C G T A C G T G T C A A C G T A T C G A G T C C G A T C A T G C T G A A C G T C G T A C T G A A T G C G A T C C T A G A C T G C T A G C G T A
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ATGCTGRTAACYRGGA
ATTATGCTAATTT------
 A C G T A C G T A C G T G T C A A C G T A T C G A G T C C G A T C A T G C T G A A C G T C G T A C T G A A T G C G A T C C T A G A C T G C T A G C G T A
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T