Information for 17-RRTSCATGSAYYRCYA (Motif 38)

C T A G T C A G A C G T A T C G A G T C C G T A A C G T A C T G A T C G C G T A A G C T A G T C C T G A A G T C G A T C C G T A
Reverse Opposite:
A C G T C T A G A C T G A G C T C T A G C T G A A C G T A T G C A G T C C G T A C G A T A C T G A T G C C G T A A G T C A G T C
p-value:1e-4
log p-value:-9.504e+00
Information Content per bp:1.816
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.7 +/- 24.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--RRTSCATGSAYYRCYA
ACTATGAATGAATGAT--
 A C G T A C G T C T A G T C A G A C G T A T C G A G T C C G T A A C G T A C T G A T C G C G T A A G C T A G T C C T G A A G T C G A T C C G T A
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:RRTSCATGSAYYRCYA-
--TGCCTGCGYCMCCTT
 C T A G T C A G A C G T A T C G A G T C C G T A A C G T A C T G A T C G C G T A A G C T A G T C C T G A A G T C G A T C C G T A A C G T
A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--RRTSCATGSAYYRCYA
AAAATACATGTAATACT-
 A C G T A C G T C T A G T C A G A C G T A T C G A G T C C G T A A C G T A C T G A T C G C G T A A G C T A G T C C T G A A G T C G A T C C G T A
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--RRTSCATGSAYYRCYA
AAAATACATGTAAAAAT-
 A C G T A C G T C T A G T C A G A C G T A T C G A G T C C G T A A C G T A C T G A T C G C G T A A G C T A G T C C T G A A G T C G A T C C G T A
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--RRTSCATGSAYYRCYA
AATATACATGTAATATA-
 A C G T A C G T C T A G T C A G A C G T A T C G A G T C C G T A A C G T A C T G A T C G C G T A A G C T A G T C C T G A A G T C G A T C C G T A
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--RRTSCATGSAYYRCYA
TAAATACATGTAAAATT-
 A C G T A C G T C T A G T C A G A C G T A T C G A G T C C G T A A C G T A C T G A T C G C G T A A G C T A G T C C T G A A G T C G A T C C G T A
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:RRTSCATGSAYYRCYA
---AGATGCAATCCC-
 C T A G T C A G A C G T A T C G A G T C C G T A A C G T A C T G A T C G C G T A A G C T A G T C C T G A A G T C G A T C C G T A
A C G T A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T

PH0086.1_Irx5/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--RRTSCATGSAYYRCYA
AATATACATGTAAAATT-
 A C G T A C G T C T A G T C A G A C G T A T C G A G T C C G T A A C G T A C T G A T C G C G T A A G C T A G T C C T G A A G T C G A T C C G T A
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--RRTSCATGSAYYRCYA
AATATACATGTAAAACA-
 A C G T A C G T C T A G T C A G A C G T A T C G A G T C C G T A A C G T A C T G A T C G C G T A A G C T A G T C C T G A A G T C G A T C C G T A
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:RRTSCATGSAYYRCYA
-----ATTGATTYND-
 C T A G T C A G A C G T A T C G A G T C C G T A A C G T A C T G A T C G C G T A A G C T A G T C C T G A A G T C G A T C C G T A
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T A C G T