Information for 10-AGGGGATTAC (Motif 37)

C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A A C G T G T A C A G T C A G T C A G T C A C G T
p-value:1e-4
log p-value:-9.504e+00
Information Content per bp:1.957
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.2 +/- 23.2bp
Average Position of motif in Background25.1 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0121.1_Obox1/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---AGGGGATTAC----
TTAAGGGGATTAACTAC
 A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

Crx/MA0467.1/Jaspar

Match Rank:2
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-AGGGGATTAC
AAGAGGATTAG
 A C G T C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T C G T A A G T C
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:AGGGGATTAC
-NGGGATTA-
 C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T C G T A A G T C
A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T

PH0015.1_Crx/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---AGGGGATTAC---
CGTTGGGGATTAGCCT
 A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AGGGGATTAC-
-NNGGATTAGN
 C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T C G T A A G T C A C G T
A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AGGGGATTAC-----
AGGGGGATTAGCTGCC
 A C G T C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:AGGGGATTAC-
--GGGATTANN
 C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T C G T A A G T C A C G T
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

GSC2/MA0891.1/Jaspar

Match Rank:8
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AGGGGATTAC-
-GNGGATTAGN
 C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T C G T A A G T C A C G T
A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

PH0129.1_Otx1/Jaspar

Match Rank:9
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AGGGGATTAC-----
AGAGGGGATTAATTTAT
 A C G T A C G T C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:AGGGGATTAC
--GGGATTAA
 C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T C G T A A G T C
A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A