Information for 24-CAGMGCAACCAAA (Motif 36)

G T A C C G T A A C T G T G A C A C T G T A G C T G C A C T G A G T A C G A T C G T C A T C G A C G T A
Reverse Opposite:
G C A T A G C T A C G T C A T G A C T G G A C T A C G T A T C G A G T C A C T G G T A C G A C T A C T G
p-value:1e-5
log p-value:-1.235e+01
Information Content per bp:1.671
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif153.7
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets48.4 +/- 28.2bp
Average Position of motif in Background51.6 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CAGMGCAACCAAA
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C A C T G T A G C T G C A C T G A G T A C G A T C G T C A T C G A C G T A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAGMGCAACCAAA
TACCATAGCAACGGT-
 A C G T A C G T A C G T G T A C C G T A A C T G T G A C A C T G T A G C T G C A C T G A G T A C G A T C G T C A T C G A C G T A
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CAGMGCAACCAAA
CACAGN---------
 A C G T A C G T G T A C C G T A A C T G T G A C A C T G T A G C T G C A C T G A G T A C G A T C G T C A T C G A C G T A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CAGMGCAACCAAA
CCGCATAGCAACGGA-
 A C G T A C G T A C G T G T A C C G T A A C T G T G A C A C T G T A G C T G C A C T G A G T A C G A T C G T C A T C G A C G T A
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------CAGMGCAACCAAA---
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C A C T G T A G C T G C A C T G A G T A C G A T C G T C A T C G A C G T A A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAGMGCAACCAAA----
-AAAGTAAACAAAAATT
 G T A C C G T A A C T G T G A C A C T G T A G C T G C A C T G A G T A C G A T C G T C A T C G A C G T A A C G T A C G T A C G T A C G T
A C G T G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CAGMGCAACCAAA
----CCAATCAA-
 G T A C C G T A A C T G T G A C A C T G T A G C T G C A C T G A G T A C G A T C G T C A T C G A C G T A
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CAGMGCAACCAAA
TTGCCATGGCAACN---
 A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C A C T G T A G C T G C A C T G A G T A C G A T C G T C A T C G A C G T A
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CAGMGCAACCAAA
GTTGCCATGGCAAC----
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C A C T G T A G C T G C A C T G A G T A C G A T C G T C A T C G A C G T A
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CAGMGCAACCAAA
TTGCCATGGCAACC---
 A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C A C T G T A G C T G C A C T G A G T A C G A T C G T C A T C G A C G T A
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C A C G T A C G T A C G T