Information for 23-GRATSASCASGGG (Motif 35)

A C T G C T A G C G T A A C G T A T G C C G T A A T G C A G T C C G T A A T C G A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A T G C A C G T A C T G A T C G A C G T A T C G C G T A A C G T A G T C A G T C
p-value:1e-5
log p-value:-1.294e+01
Information Content per bp:1.884
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.8 +/- 28.6bp
Average Position of motif in Background28.5 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GRATSASCASGGG-
--CACAGCAGGGGG
 A C T G C T A G C G T A A C G T A T G C C G T A A T G C A G T C C G T A A T C G A C T G A C T G A C T G A C G T
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GRATSASCASGGG
-DCTCAGCAGG--
 A C T G C T A G C G T A A C G T A T G C C G T A A T G C A G T C C G T A A T C G A C T G A C T G A C T G
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GRATSASCASGGG---
-DCHCAGCAGGRGGCC
 A C T G C T A G C G T A A C G T A T G C C G T A A T G C A G T C C G T A A T C G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GRATSASCASGGG
-----ACCACGTG
 A C T G C T A G C G T A A C G T A T G C C G T A A T G C A G T C C G T A A T C G A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GRATSASCASGGG
TGAGTCAGCA----
 A C G T A C T G C T A G C G T A A C G T A T G C C G T A A T G C A G T C C G T A A T C G A C T G A C T G A C T G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GRATSASCASGGG---
--NTGCCCANNGGTNA
 A C T G C T A G C G T A A C G T A T G C C G T A A T G C A G T C C G T A A T C G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GRATSASCASGGG-
--GTCCCCAGGGGA
 A C T G C T A G C G T A A C G T A T G C C G T A A T G C A G T C C G T A A T C G A C T G A C T G A C T G A C G T
A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

PB0043.1_Max_1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GRATSASCASGGG------
---TGACCACGTGGTCGGG
 A C T G C T A G C G T A A C G T A T G C C G T A A T G C A G T C C G T A A T C G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C A T G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T A T G C T C A G C A T G C A T G

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GRATSASCASGGG------
--ATCCACAGGTGCGAAAA
 A C T G C T A G C G T A A C G T A T G C C G T A A T G C A G T C C G T A A T C G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GRATSASCASGGG
AGGATGACTCAGCAC---
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A A C G T A T G C C G T A A T G C A G T C C G T A A T C G A C T G A C T G A C T G
C T G A A T C G T A C G T C G A G C A T A C T G C G T A A T G C C A G T T G A C C T G A A T C G A G T C C G T A A T G C A C G T A C G T A C G T