Information for 22-ACTAGCGGTGCAT (Motif 34)

C G T A T A G C G A C T C G T A C T A G G T A C A C T G A C T G A C G T A T C G A G T C G T C A A G C T
Reverse Opposite:
C T G A A C G T C T A G A T G C G T C A A G T C T A G C C A T G A G T C C G A T C G T A A C T G A C G T
p-value:1e-5
log p-value:-1.311e+01
Information Content per bp:1.724
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif16.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.6 +/- 28.8bp
Average Position of motif in Background53.3 +/- 34.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:ACTAGCGGTGCAT
----NGTGGGCAT
 C G T A T A G C G A C T C G T A C T A G G T A C A C T G A C T G A C G T A T C G A G T C G T C A A G C T
A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

PH0170.1_Tgif2/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ACTAGCGGTGCAT--
AACTAGCTGTCAATAC
 A C G T C G T A T A G C G A C T C G T A C T A G G T A C A C T G A C T G A C G T A T C G A G T C G T C A A G C T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:forward strand
Alignment:ACTAGCGGTGCAT------
--CAGATGTGCACATACGT
 C G T A T A G C G A C T C G T A C T A G G T A C A C T G A C T G A C G T A T C G A G T C G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:ACTAGCGGTGCAT------
--TACATGTGCACATAAAA
 C G T A T A G C G A C T C G T A C T A G G T A C A C T G A C T G A C G T A T C G A G T C G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:5
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--ACTAGCGGTGCAT
GVACAGNMTGTYCTB
 A C G T A C G T C G T A T A G C G A C T C G T A C T A G G T A C A C T G A C T G A C G T A T C G A G T C G T C A A G C T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:6
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-ACTAGCGGTGCAT
BAACAGCTGT----
 A C G T C G T A T A G C G A C T C G T A C T A G G T A C A C T G A C T G A C G T A T C G A G T C G T C A A G C T
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.50
Offset:4
Orientation:forward strand
Alignment:ACTAGCGGTGCAT---
----NNTGTGGATTSS
 C G T A T A G C G A C T C G T A C T A G G T A C A C T G A C T G A C G T A T C G A G T C G T C A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PH0098.1_Lhx8/Jaspar

Match Rank:8
Score:0.50
Offset:-7
Orientation:forward strand
Alignment:-------ACTAGCGGTGCAT
ACCCCTAATTAGCGGTG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C G A C T C G T A C T A G G T A C A C T G A C T G A C G T A T C G A G T C G T C A A G C T
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:9
Score:0.49
Offset:3
Orientation:forward strand
Alignment:ACTAGCGGTGCAT
---RTACGTGC--
 C G T A T A G C G A C T C G T A C T A G G T A C A C T G A C T G A C G T A T C G A G T C G T C A A G C T
A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---ACTAGCGGTGCAT
AGNACANNNTGTNCTN
 A C G T A C G T A C G T C G T A T A G C G A C T C G T A C T A G G T A C A C T G A C T G A C G T A T C G A G T C G T C A A G C T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C