Information for 21-CHGGGATTTCTGA (Motif 33)

A T G C G A T C C T A G C T A G A C T G G T C A A C G T A C G T A C G T A T G C A G C T C T A G C T G A
Reverse Opposite:
G A C T A G T C C T G A A T C G T C G A C G T A G T C A A C G T A G T C A G T C G A T C C T A G A T C G
p-value:1e-6
log p-value:-1.487e+01
Information Content per bp:1.702
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.54%
Number of Background Sequences with motif234.1
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets51.1 +/- 25.0bp
Average Position of motif in Background48.6 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CHGGGATTTCTGA
CNGTGATTTN---
 A T G C G A T C C T A G C T A G A C T G G T C A A C G T A C G T A C G T A T G C A G C T C T A G C T G A
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CHGGGATTTCTGA
TGCTGTGATTT----
 A C G T A C G T A T G C G A T C C T A G C T A G A C T G G T C A A C G T A C G T A C G T A T G C A G C T C T A G C T G A
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CHGGGATTTCTGA
-GGGGATTTCC--
 A T G C G A T C C T A G C T A G A C T G G T C A A C G T A C G T A C G T A T G C A G C T C T A G C T G A
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CHGGGATTTCTGA
-GGGAATTTCC--
 A T G C G A T C C T A G C T A G A C T G G T C A A C G T A C G T A C G T A T G C A G C T C T A G C T G A
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CHGGGATTTCTGA
GCAGTGATTT----
 A C G T A T G C G A T C C T A G C T A G A C T G G T C A A C G T A C G T A C G T A T G C A G C T C T A G C T G A
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CHGGGATTTCTGA
-NGGGATTA----
 A T G C G A T C C T A G C T A G A C T G G T C A A C G T A C G T A C G T A T G C A G C T C T A G C T G A
A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CHGGGATTTCTGA
-GGGGATTTCC--
 A T G C G A T C C T A G C T A G A C T G G T C A A C G T A C G T A C G T A T G C A G C T C T A G C T G A
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CHGGGATTTCTGA--
TNNNATGATTTCNNCNN
 A C G T A C G T A T G C G A T C C T A G C T A G A C T G G T C A A C G T A C G T A C G T A T G C A G C T C T A G C T G A A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CHGGGATTTCTGA
--GGGATTANN--
 A T G C G A T C C T A G C T A G A C T G G T C A A C G T A C G T A C G T A T G C A G C T C T A G C T G A
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T

PB0115.1_Ehf_2/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CHGGGATTTCTGA----
-TAGTATTTCCGATCTT
 A T G C G A T C C T A G C T A G A C T G G T C A A C G T A C G T A C G T A T G C A G C T C T A G C T G A A C G T A C G T A C G T A C G T
A C G T C G A T C G T A T C A G C A G T C T G A A C G T C G A T C G A T G A T C G A T C A C T G G C T A G C A T T A G C C G A T G C A T