Information for 20-CYTSMGGACWGAG (Motif 31)

A G T C A G T C A C G T A T G C T G A C A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G A T A C T G A C G T A G T C A G T C A C G T A T C G G T C A C T A G A C T G
p-value:1e-6
log p-value:-1.528e+01
Information Content per bp:1.874
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.7 +/- 28.3bp
Average Position of motif in Background68.3 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CYTSMGGACWGAG
TCACCTCTGGGCAG--
 A C G T A C G T A C G T A G T C A G T C A C G T A T G C T G A C A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CYTSMGGACWGAG
GCCTCAGGGCAT--
 A C G T A G T C A G T C A C G T A T G C T G A C A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CYTSMGGACWGAG
SCCTSAGGSCAW--
 A C G T A G T C A G T C A C G T A T G C T G A C A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CYTSMGGACWGAG-
----GGAACAAAGR
 A G T C A G T C A C G T A T G C T G A C A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

Gabpa/MA0062.2/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CYTSMGGACWGAG
NCCACTTCCGG------
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A T G C T G A C A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G
A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CYTSMGGACWGAG
--TRAGGTCA---
 A G T C A G T C A C G T A T G C T G A C A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

ELK1/MA0028.2/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CYTSMGGACWGAG
NACTTCCGGT-----
 A C G T A C G T A G T C A G T C A C G T A T G C T G A C A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G
G A T C T C G A A G T C C G A T A C G T T G A C T G A C A C T G A T C G G A C T A C G T A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CYTSMGGACWGAG----
--AGGGGTCAGAGGTCA
 A G T C A G T C A C G T A T G C T G A C A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CYTSMGGACWGAG
--TNNGGGCAG--
 A G T C A G T C A C G T A T G C T G A C A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CYTSMGGACWGAG
--TGCTGACTCA-
 A G T C A G T C A C G T A T G C T G A C A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G
A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T