Information for 8-GCGCCAGAGG (Motif 28)

A T C G T A G C C T A G G A T C A T G C C G T A A C T G C T G A A C T G C A T G
Reverse Opposite:
G T A C A G T C A G C T A G T C A C G T A T C G C T A G G A T C A C T G A T G C
p-value:1e-7
log p-value:-1.683e+01
Information Content per bp:1.836
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif75.1
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets36.8 +/- 25.0bp
Average Position of motif in Background52.8 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------GCGCCAGAGG-
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G T A G C C T A G G A T C A T G C C G T A A C T G C T G A A C T G C A T G A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------GCGCCAGAGG-
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G T A G C C T A G G A T C A T G C C G T A A C T G C T G A A C T G C A T G A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCGCCAGAGG
TTTGGCGCCAAA--
 A C G T A C G T A C G T A C G T A T C G T A G C C T A G G A T C A T G C C G T A A C T G C T G A A C T G C A T G
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCGCCAGAGG--
-AGCCTCAGGCA
 A T C G T A G C C T A G G A T C A T G C C G T A A C T G C T G A A C T G C A T G A C G T A C G T
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCGCCAGAGG--
-NGCCTGAGGCN
 A T C G T A G C C T A G G A T C A T G C C G T A A C T G C T G A A C T G C A T G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCGCCAGAGG--
-TGCCTGAGGCN
 A T C G T A G C C T A G G A T C A T G C C G T A A C T G C T G A A C T G C A T G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCGCCAGAGG----
ATTGCCTGAGGCAAT
 A C G T A T C G T A G C C T A G G A T C A T G C C G T A A C T G C T G A A C T G C A T G A C G T A C G T A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCGCCAGAGG---
TGGGGCAAAGGTCA
 A C G T A T C G T A G C C T A G G A T C A T G C C G T A A C T G C T G A A C T G C A T G A C G T A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

ZBTB33/MA0527.1/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GCGCCAGAGG
NAGNTCTCGCGAGAN-
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G T A G C C T A G G A T C A T G C C G T A A C T G C T G A A C T G C A T G
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCGCCAGAGG---
AGGGGTCAGAGGTCA
 A C G T A C G T A T C G T A G C C T A G G A T C A T G C C G T A A C T G C T G A A C T G C A T G A C G T A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A