Information for 13-ACTTAATGACAAG (Motif 24)

C G T A A G T C A C G T A G C T C G T A C G T A C G A T C T A G C G T A A G T C C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C G T C T G A C G T A A C T G A C G T
p-value:1e-8
log p-value:-1.992e+01
Information Content per bp:1.934
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.4 +/- 22.6bp
Average Position of motif in Background42.5 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX6-1/MA0674.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ACTTAATGACAAG
--TTAATTAN---
 C G T A A G T C A C G T A G C T C G T A C G T A C G A T C T A G C G T A A G T C C G T A C G T A A C T G
A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C A C G T A C G T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACTTAATGACAAG-
NNAATTAATGACCNNN
 A C G T A C G T C G T A A G T C A C G T A G C T C G T A C G T A C G A T C T A G C G T A A G T C C G T A C G T A A C T G A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

PH0004.1_Nkx3-2/Jaspar

Match Rank:3
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------ACTTAATGACAAG
CATAACCACTTAACAAC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G C T C G T A C G T A C G A T C T A G C G T A A G T C C G T A C G T A A C T G
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:4
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------ACTTAATGACAAG
CTTAACCACTTAAGGAT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G C T C G T A C G T A C G A T C T A G C G T A A G T C C G T A C G T A A C T G
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T A C G T A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ACTTAATGACAAG
--TTAATTAN---
 C G T A A G T C A C G T A G C T C G T A C G T A C G A T C T A G C G T A A G T C C G T A C G T A A C T G
A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G A C G T A C G T A C G T

MEOX2/MA0706.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACTTAATGACAAG
-NTTAATTACN--
 C G T A A G T C A C G T A G C T C G T A C G T A C G A T C T A G C G T A A G T C C G T A C G T A A C T G
A C G T A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACTTAATGACAAG
ACCACTTAA-------
 A C G T A C G T A C G T C G T A A G T C A C G T A G C T C G T A C G T A C G A T C T A G C G T A A G T C C G T A C G T A A C T G
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACTTAATGACAAG
NTTTTACGAC---
 C G T A A G T C A C G T A G C T C G T A C G T A C G A T C T A G C G T A A G T C C G T A C G T A A C T G
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T A C G T

VAX2/MA0723.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ACTTAATGACAAG
--CTAATTAC---
 C G T A A G T C A C G T A G C T C G T A C G T A C G A T C T A G C G T A A G T C C G T A C G T A A C T G
A C G T A C G T A G T C G A C T G T C A G C T A C G A T C A G T C T G A A G T C A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.59
Offset:5
Orientation:forward strand
Alignment:ACTTAATGACAAG
-----TTGACAG-
 C G T A A G T C A C G T A G C T C G T A C G T A C G A T C T A G C G T A A G T C C G T A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T