Information for 3-GGGAGGAACGGCC (Motif 13)

A C T G A C T G A C T G C G T A A C T G C T A G C G T A C T G A A G T C C A T G A C T G G T A C G T A C
Reverse Opposite:
A C T G A C T G A G T C G T A C A C T G A G C T C G A T A G T C A G T C C G A T A G T C A G T C A G T C
p-value:1e-11
log p-value:-2.682e+01
Information Content per bp:1.841
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.6 +/- 37.0bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGGAGGAACGGCC
AGGGGGCGGGGCTG--
 A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C T G C T A G C G T A C T G A A G T C C A T G A C T G G T A C G T A C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGGAGGAACGGCC
GGGAGGACNG---
 A C T G A C T G A C T G C G T A A C T G C T A G C G T A C T G A A G T C C A T G A C T G G T A C G T A C
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGGAGGAACGGCC
RGKGGGCGGAGC----
 A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C T G C T A G C G T A C T G A A G T C C A T G A C T G G T A C G T A C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GGGAGGAACGGCC
---TGGAACAGMA
 A C T G A C T G A C T G C G T A A C T G C T A G C G T A C T G A A G T C C A T G A C T G G T A C G T A C
A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGGAGGAACGGCC
GGGGGCGGGGC----
 A C G T A C G T A C T G A C T G A C T G C G T A A C T G C T A G C G T A C T G A A G T C C A T G A C T G G T A C G T A C
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGGAGGAACGGCC
GGGGNGGGGC----
 A C G T A C T G A C T G A C T G C G T A A C T G C T A G C G T A C T G A A G T C C A T G A C T G G T A C G T A C
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGGAGGAACGGCC
TGGGGAAGGGCM---
 A C G T A C G T A C T G A C T G A C T G C G T A A C T G C T A G C G T A C T G A A G T C C A T G A C T G G T A C G T A C
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GGGAGGAACGGCC
NNTNAGGGGCGGNNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C T G C T A G C G T A C T G A A G T C C A T G A C T G G T A C G T A C
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGGAGGAACGGCC
NNVDGGGYGGGGCYN--
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C T G C T A G C G T A C T G A A G T C C A T G A C T G G T A C G T A C
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:10
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GGGAGGAACGGCC
GGGNGGGGGCGGGGC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C T G C T A G C G T A C T G A A G T C C A T G A C T G G T A C G T A C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T A C G T