Information for 5-ATCAGATGCA (Motif 12)

C T G A A G C T A G T C C G T A C T A G T G C A A C G T A C T G A G T C G T C A
Reverse Opposite:
C A G T A C T G A G T C C G T A A C G T A G T C C G A T C T A G T C G A A G C T
p-value:1e-11
log p-value:-2.714e+01
Information Content per bp:1.821
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.88%
Number of Background Sequences with motif131.2
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets44.7 +/- 29.4bp
Average Position of motif in Background55.1 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ATCAGATGCA
AACAGATGGT
 C T G A A G C T A G T C C G T A C T A G T G C A A C G T A C T G A G T C G T C A
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ATCAGATGCA
NNVVCAGCTGBN
 A C G T A C G T C T G A A G C T A G T C C G T A C T A G T G C A A C G T A C T G A G T C G T C A
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATCAGATGCA----
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T C T G A A G C T A G T C C G T A C T A G T G C A A C G T A C T G A G T C G T C A A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ATCAGATGCA
--CAGCTGNT
 C T G A A G C T A G T C C G T A C T A G T G C A A C G T A C T G A G T C G T C A
A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATCAGATGCA
AGCAGCTGCT
 C T G A A G C T A G T C C G T A C T A G T G C A A C G T A C T G A G T C G T C A
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATCAGATGCA
AACAGATGGC
 C T G A A G C T A G T C C G T A C T A G T G C A A C G T A C T G A G T C G T C A
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATCAGATGCA
VNAVCAGCTGGC
 A C G T A C G T C T G A A G C T A G T C C G T A C T A G T G C A A C G T A C T G A G T C G T C A
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATCAGATGCA-
AACAGCTGCAG
 C T G A A G C T A G T C C G T A C T A G T G C A A C G T A C T G A G T C G T C A A C G T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATCAGATGCA
NGNGACAGCTGCN
 A C G T A C G T A C G T C T G A A G C T A G T C C G T A C T A G T G C A A C G T A C T G A G T C G T C A
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATCAGATGCA
CAGCAGCTGN-
 A C G T C T G A A G C T A G T C C G T A C T A G T G C A A C G T A C T G A G T C G T C A
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T