Information for 16-CATTAGGCCAAGG (Motif 36)

A G T C C G T A A C G T A C G T C G T A C T A G A C T G G T A C G T A C C G T A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C G T A C T G A C T G A G T C A G T C A C G T G T C A C G T A A C G T A C T G
p-value:1e-7
log p-value:-1.702e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.8 +/- 23.6bp
Average Position of motif in Background52.9 +/- 3.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CATTAGGCCAAGG---
----AGGTCAAGGTCA
 A G T C C G T A A C G T A C G T C G T A C T A G A C T G G T A C G T A C C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CATTAGGCCAAGG---
----AGGTCAAGGTCA
 A G T C C G T A A C G T A C G T C G T A C T A G A C T G G T A C G T A C C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CATTAGGCCAAGG----
---CAGGCCNNGGCCNN
 A G T C C G T A A C G T A C G T C G T A C T A G A C T G G T A C G T A C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

HOXB3/MA0903.1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CATTAGGCCAAGG
ACTAATTAGC------
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A C T A G A C T G G T A C G T A C C G T A C G T A A C T G A C T G
C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CATTAGGCCAAGG
----AGGCCTAG-
 A G T C C G T A A C G T A C G T C G T A C T A G A C T G G T A C G T A C C G T A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CATTAGGCCAAGG---
------NTCAAGGTCA
 A G T C C G T A A C G T A C G T C G T A C T A G A C T G G T A C G T A C C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CATTAGGCCAAGG
TGGCACCATGCCAA--
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A C T A G A C T G G T A C G T A C C G T A C G T A A C T G A C T G
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CATTAGGCCAAGG
GCAATTAG-------
 A C G T A C G T A G T C C G T A A C G T A C G T C G T A C T A G A C T G G T A C G T A C C G T A C G T A A C T G A C T G
T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CATTAGGCCAAGG-----
---AAGTTCAAGGTCAGC
 A G T C C G T A A C G T A C G T C G T A C T A G A C T G G T A C G T A C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CATTAGGCCAAGG---
------BTCAAGGTCA
 A G T C C G T A A C G T A C G T C G T A C T A G A C T G G T A C G T A C C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A