Information for 4-AATCCGCCCT (Motif 9)

C G T A C T G A G C A T T G A C A T G C T A C G A T G C G A T C G T A C A G C T
Reverse Opposite:
T C G A C A T G C A T G T A C G A T G C T A C G A C T G C G T A G A C T G C A T
p-value:1e-11
log p-value:-2.618e+01
Information Content per bp:1.655
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif5.23%
Number of Background Sequences with motif732.3
Percentage of Background Sequences with motif1.55%
Average Position of motif in Targets50.6 +/- 24.3bp
Average Position of motif in Background48.9 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0143.1_Klf7_2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AATCCGCCCT----
AAGCATACGCCCAACTT
 A C G T A C G T A C G T C G T A C T G A G C A T T G A C A T G C T A C G A T G C G A T C G T A C A G C T A C G T A C G T A C G T A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AATCCGCCCT--
-GTCCGCCATTA
 C G T A C T G A G C A T T G A C A T G C T A C G A T G C G A T C G T A C A G C T A C G T A C G T
A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AATCCGCCCT--
GCTCCGCCCMCY
 C G T A C T G A G C A T T G A C A T G C T A C G A T G C G A T C G T A C A G C T A C G T A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

OTX1/MA0711.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AATCCGCCCT
TTAATCCG----
 A C G T A C G T C G T A C T G A G C A T T G A C A T G C T A C G A T G C G A T C G T A C A G C T
G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:5
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------AATCCGCCCT
NNNAATTAATCCCCNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A G C A T T G A C A T G C T A C G A T G C G A T C G T A C A G C T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------AATCCGCCCT
GNNAGCTAATCCCCCN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A G C A T T G A C A T G C T A C G A T G C G A T C G T A C A G C T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AATCCGCCCT
CCTAATCCGC---
 A C G T A C G T A C G T C G T A C T G A G C A T T G A C A T G C T A C G A T G C G A T C G T A C A G C T
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AATCCGCCCT--
NAGCCCCGCCCCCN
 A C G T A C G T C G T A C T G A G C A T T G A C A T G C T A C G A T G C G A T C G T A C A G C T A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

PB0202.1_Zfp410_2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AATCCGCCCT-----
TCACCCCGCCCCAAATT
 A C G T A C G T C G T A C T G A G C A T T G A C A T G C T A C G A T G C G A T C G T A C A G C T A C G T A C G T A C G T A C G T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AATCCGCCCT-----
ATCCCCGCCCCTAAAA
 A C G T C G T A C T G A G C A T T G A C A T G C T A C G A T G C G A T C G T A C A G C T A C G T A C G T A C G T A C G T A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A