Information for 3-CTGGCAGCTTCGG (Motif 8)

A G T C A G C T A C T G A C T G A G T C C T G A A C T G G T A C A G C T A C G T A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G C G T A C T G A A C T G A G T C A G C T A C T G A G T C A G T C C T G A A C T G
p-value:1e-11
log p-value:-2.651e+01
Information Content per bp:1.943
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets75.2 +/- 13.4bp
Average Position of motif in Background51.5 +/- 10.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTGGCAGCTTCGG
--CGCAGCTGCG-
 A G T C A G C T A C T G A C T G A G T C C T G A A C T G G T A C A G C T A C G T A G T C A C T G A C T G
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCAGCTTCGG
CTTGGCAA------
 A C G T A G T C A G C T A C T G A C T G A G T C C T G A A C T G G T A C A G C T A C G T A G T C A C T G A C T G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCAGCTTCGG
VBTGWCAGCB----
 A C G T A G T C A G C T A C T G A C T G A G T C C T G A A C T G G T A C A G C T A C G T A G T C A C T G A C T G
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTGGCAGCTTCGG---
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T A G T C A G C T A C T G A C T G A G T C C T G A A C T G G T A C A G C T A C G T A G T C A C T G A C T G A C G T A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

Myb/MA0100.2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGGCAGCTTCGG
-TGGCAGTTGN--
 A G T C A G C T A C T G A C T G A G T C C T G A A C T G G T A C A G C T A C G T A G T C A C T G A C T G
A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTGGCAGCTTCGG
TTGGCA-------
 A G T C A G C T A C T G A C T G A G T C C T G A A C T G G T A C A G C T A C G T A G T C A C T G A C T G
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCAGCTTCGG
NTTGGCANN-----
 A C G T A G T C A G C T A C T G A C T G A G T C C T G A A C T G G T A C A G C T A C G T A G T C A C T G A C T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CTGGCAGCTTCGG
CAATCACTGGCAGAAT---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C T G A C T G A G T C C T G A A C T G G T A C A G C T A C G T A G T C A C T G A C T G
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T A C G T A C G T A C G T

HSF4/MA0771.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTGGCAGCTTCGG
TTCTAGAACGTTC--
 A C G T A C G T A G T C A G C T A C T G A C T G A G T C C T G A A C T G G T A C A G C T A C G T A G T C A C T G A C T G
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTGGCAGCTTCGG
GATATTGACAGCTGCGT
 A C G T A C G T A C G T A C G T A G T C A G C T A C T G A C T G A G T C C T G A A C T G G T A C A G C T A C G T A G T C A C T G A C T G
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T