Information for 1-CTGCAGCCATCTG (Motif 3)

G T A C C G A T A C T G G T A C C G T A A C T G A G T C A G T C C G T A G A C T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A A C G T C T A G A C T G A G T C A C G T A C T G A G T C C G T A A C T G
p-value:1e-15
log p-value:-3.661e+01
Information Content per bp:1.897
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.9 +/- 23.3bp
Average Position of motif in Background71.9 +/- 1.4bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.73
Offset:5
Orientation:forward strand
Alignment:CTGCAGCCATCTG--
-----GCCATCTGTT
 G T A C C G A T A C T G G T A C C G T A A C T G A G T C A G T C C G T A G A C T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTGCAGCCATCTG-----
-CCNNACCATCTGGCCTN
 G T A C C G A T A C T G G T A C C G T A A C T G A G T C A G T C C G T A G A C T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.68
Offset:5
Orientation:forward strand
Alignment:CTGCAGCCATCTG--
-----ACCATCTGTT
 G T A C C G A T A C T G G T A C C G T A A C T G A G T C A G T C C G T A G A C T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CTGCAGCCATCTG-
--GCCGCCATCTTG
 G T A C C G A T A C T G G T A C C G T A A C T G A G T C A G T C C G T A G A C T A G T C A C G T A C T G A C G T
A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTGCAGCCATCTG-
--GCNGCCATCTTG
 G T A C C G A T A C T G G T A C C G T A A C T G A G T C A G T C C G T A G A C T A G T C A C G T A C T G A C G T
A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CTGCAGCCATCTG--
-----RCCATMTGTT
 G T A C C G A T A C T G G T A C C G T A A C T G A G T C A G T C C G T A G A C T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CTGCAGCCATCTG----
-----GCCAGCTGBTNB
 G T A C C G A T A C T G G T A C C G T A A C T G A G T C A G T C C G T A G A C T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

PB0047.1_Myf6_1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTGCAGCCATCTG------
---CNGACACCTGTTCNNN
 G T A C C G A T A C T G G T A C C G T A A C T G A G T C A G T C C G T A G A C T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CTGCAGCCATCTG----
-----NVCAGCTGBBNN
 G T A C C G A T A C T G G T A C C G T A A C T G A G T C A G T C C G T A G A C T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Bhlha15/MA0607.1/Jaspar

Match Rank:10
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CTGCAGCCATCTG-
------CCATATGT
 G T A C C G A T A C T G G T A C C G T A A C T G A G T C A G T C C G T A G A C T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T