Information for 8-GCTCCTGGCTCCTGGC (Motif 23)

A C T G A G T C C A G T A G T C G A T C G C A T A C T G A C T G A T G C A C G T A T G C A G T C A G C T A T C G A C T G A G T C
Reverse Opposite:
T A C G T A G C A T G C C T G A A C T G A T C G C G T A A T C G A G T C A G T C C G T A C A T G C T A G G T C A A C T G A G T C
p-value:1e-4
log p-value:-1.056e+01
Information Content per bp:1.867
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.0 +/- 26.0bp
Average Position of motif in Background78.5 +/- 2.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCTCCTGGCTCCTGGC---
---CTTGGCANNNTGCCAA
 A C T G A G T C C A G T A G T C G A T C G C A T A C T G A C T G A T G C A C G T A T G C A G T C A G C T A T C G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.52
Offset:7
Orientation:forward strand
Alignment:GCTCCTGGCTCCTGGC
-------GCTCCG---
 A C T G A G T C C A G T A G T C G A T C G C A T A C T G A C T G A T G C A C G T A T G C A G T C A G C T A T C G A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GCTCCTGGCTCCTGGC
------NGCTN-----
 A C T G A G T C C A G T A G T C G A T C G C A T A C T G A C T G A T G C A C G T A T G C A G T C A G C T A T C G A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GCTCCTGGCTCCTGGC-
NNNNTTGGCGCCGANNN
 A C T G A G T C C A G T A G T C G A T C G C A T A C T G A C T G A T G C A C G T A T G C A G T C A G C T A T C G A C T G A G T C A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:5
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GCTCCTGGCTCCTGGC---
-----TGGCACCATGCCAA
 A C T G A G T C C A G T A G T C G A T C G C A T A C T G A C T G A T G C A C G T A T G C A G T C A G C T A T C G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:GCTCCTGGCTCCTGGC----
-----RGSMTBCTGGGAAAT
 A C T G A G T C C A G T A G T C G A T C G C A T A C T G A C T G A T G C A C G T A T G C A G T C A G C T A T C G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCTGGCTCCTGGC
GGCTCYAKCAYC-----
 A C G T A C T G A G T C C A G T A G T C G A T C G C A T A C T G A C T G A T G C A C G T A T G C A G T C A G C T A T C G A C T G A G T C
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:GCTCCTGGCTCCTGGC---
---CNNNGCTACTGTANNN
 A C T G A G T C C A G T A G T C G A T C G C A T A C T G A C T G A T G C A C G T A T G C A G T C A G C T A T C G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCTGGCTCCTGGC
NGCCTNAGGCN------
 A C G T A C T G A G T C C A G T A G T C G A T C G C A T A C T G A C T G A T G C A C G T A T G C A G T C A G C T A T C G A C T G A G T C
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GCTCCTGGCTCCTGGC-
NNNNTTGACCCCTNNNN
 A C T G A G T C C A G T A G T C G A T C G C A T A C T G A C T G A T G C A C G T A T G C A G T C A G C T A T C G A C T G A G T C A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C