Information for 10-GCGGACCTAAGGA (Motif 17)

A C T G G T A C A C T G A C T G G T C A T A G C A G T C A C G T C T G A C T G A A C T G A C T G C T G A
Reverse Opposite:
A G C T A G T C A G T C A G C T A G C T G T C A C T A G A T C G A C G T A G T C T G A C A C T G A G T C
p-value:1e-9
log p-value:-2.140e+01
Information Content per bp:1.919
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.4 +/- 26.1bp
Average Position of motif in Background50.6 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCGGACCTAAGGA
NCGCGGACGTTG---
 A C G T A C G T A C T G G T A C A C T G A C T G G T C A T A G C A G T C A C G T C T G A C T G A A C T G A C T G C T G A
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCGGACCTAAGGA--
-NTGCCCANNGGTNA
 A C T G G T A C A C T G A C T G G T C A T A G C A G T C A C G T C T G A C T G A A C T G A C T G C T G A A C G T A C G T
A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCGGACCTAAGGA
-ATGCCCTGAGGC
 A C T G G T A C A C T G A C T G G T C A T A G C A G T C A C G T C T G A C T G A A C T G A C T G C T G A
A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GCGGACCTAAGGA
ARGAGGMCAAAATGW
 A C G T A C G T A C T G G T A C A C T G A C T G G T C A T A G C A G T C A C G T C T G A C T G A A C T G A C T G C T G A
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GCGGACCTAAGGA
--TGACCT-----
 A C T G G T A C A C T G A C T G G T C A T A G C A G T C A C G T C T G A C T G A A C T G A C T G C T G A
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCGGACCTAAGGA
-WTGSCCTSAGGS
 A C T G G T A C A C T G A C T G G T C A T A G C A G T C A C G T C T G A C T G A A C T G A C T G C T G A
A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GCGGACCTAAGGA
-CGGAGC------
 A C T G G T A C A C T G A C T G G T C A T A G C A G T C A C G T C T G A C T G A A C T G A C T G C T G A
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GCGGACCTAAGGA
--GGAACAAAGR-
 A C T G G T A C A C T G A C T G G T C A T A G C A G T C A C G T C T G A C T G A A C T G A C T G C T G A
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

HLTF/MA0109.1/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GCGGACCTAAGGA-
----NNATAAGGNN
 A C T G G T A C A C T G A C T G G T C A T A G C A G T C A C G T C T G A C T G A A C T G A C T G C T G A A C G T
A C G T A C G T A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

PLAG1/MA0163.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GCGGACCTAAGGA-
GGGGCCCAAGGGGG
 A C T G G T A C A C T G A C T G G T C A T A G C A G T C A C G T C T G A C T G A A C T G A C T G C T G A A C G T
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G