Information for 5-CTGACCASAA (Motif 13)

A T G C G C A T A T C G T C G A A G T C G A T C T C G A A T G C G T C A T C G A
Reverse Opposite:
A G C T C A G T T A C G A G C T C T A G A C T G A G C T T A G C C G T A T A C G
p-value:1e-10
log p-value:-2.333e+01
Information Content per bp:1.667
Number of Target Sequences with motif99.0
Percentage of Target Sequences with motif11.50%
Number of Background Sequences with motif2714.7
Percentage of Background Sequences with motif5.74%
Average Position of motif in Targets50.6 +/- 27.5bp
Average Position of motif in Background49.4 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CTGACCASAA--
NWAACCACADNN
 A T G C G C A T A T C G T C G A A G T C G A T C T C G A A T G C G T C A T C G A A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CTGACCASAA
NAAACCACAG
 A T G C G C A T A T C G T C G A A G T C G A T C T C G A A T G C G T C A T C G A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTGACCASAA-
-AAACCACAGC
 A T G C G C A T A T C G T C G A A G T C G A T C T C G A A T G C G T C A T C G A A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGACCASAA--
-AAACCACAGAN
 A T G C G C A T A T C G T C G A A G T C G A T C T C G A A T G C G T C A T C G A A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGACCASAA
-TGACCT---
 A T G C G C A T A T C G T C G A A G T C G A T C T C G A A T G C G T C A T C G A
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGACCASAA
-TGACCYCT-
 A T G C G C A T A T C G T C G A A G T C G A T C T C G A A T G C G T C A T C G A
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGACCASAA
-TGACCTYA-
 A T G C G C A T A T C G T C G A A G T C G A T C T C G A A T G C G T C A T C G A
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTGACCASAA-
-AAACCGCAAA
 A T G C G C A T A T C G T C G A A G T C G A T C T C G A A T G C G T C A T C G A A C G T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTGACCASAA----
CATAAGACCACCATTAC
 A C G T A C G T A C G T A T G C G C A T A T C G T C G A A G T C G A T C T C G A A T G C G T C A T C G A A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTGACCASAA-
-AAACCACANN
 A T G C G C A T A T C G T C G A A G T C G A T C T C G A A T G C G T C A T C G A A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A