Information for 4-GCCCCTCATGAGG (Motif 7)

A C T G A T G C G T A C A T G C A T G C A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C G T C A A C G T A C T G G T C A A T C G T A C G C A T G T A C G G T A C
p-value:1e-12
log p-value:-2.932e+01
Information Content per bp:1.816
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.5 +/- 25.5bp
Average Position of motif in Background88.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mitf/MA0620.1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCCCCTCATGAGG
---GGTCACGTGG
 A C T G A T G C G T A C A T G C A T G C A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C T G
A C G T A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

PH0152.1_Pou6f1_2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCCCTCATGAGG----
AAACATAATGAGGTTGC
 A C T G A T G C G T A C A T G C A T G C A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GCCCCTCATGAGG---
----CACAGCAGGGGG
 A C T G A T G C G T A C A T G C A T G C A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCCCCTCATGAGG----
GACGATAATGAGCTTGC
 A C T G A T G C G T A C A T G C A T G C A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCCCCTCATGAGG---
-CCACACAGCAGGAGA
 A C T G A T G C G T A C A T G C A T G C A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Mycn/MA0104.3/Jaspar

Match Rank:6
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GCCCCTCATGAGG-
------CACGTGGC
 A C T G A T G C G T A C A T G C A T G C A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCCCCTCATGAGG---
-CCACACAGCAGGAGA
 A C T G A T G C G T A C A T G C A T G C A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T
A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

POU6F2/MA0793.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GCCCCTCATGAGG-
----NTAATGAGCT
 A C T G A T G C G T A C A T G C A T G C A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GCCCCTCATGAGG
------CATGAC-
 A C T G A T G C G T A C A T G C A T G C A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCCCCTCATGAGG
AGCCACTCAAG---
 A C G T A C T G A T G C G T A C A T G C A T G C A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C T G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T