Information for 10-CCTGTCCTCC (Motif 29)

A T G C G A T C A C G T T A C G C A G T G T A C A G T C G A C T A G T C G A T C
Reverse Opposite:
C A T G A C T G C T G A A C T G C A T G G T C A A T G C C G T A C T A G A T C G
p-value:1e-7
log p-value:-1.831e+01
Information Content per bp:1.835
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif4.06%
Number of Background Sequences with motif159.9
Percentage of Background Sequences with motif1.16%
Average Position of motif in Targets53.0 +/- 27.9bp
Average Position of motif in Background48.6 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CCTGTCCTCC-
-CNGTCCTCCC
 A T G C G A T C A C G T T A C G C A G T G T A C A G T C G A C T A G T C G A T C A C G T
A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CCTGTCCTCC
--TGACCTYA
 A T G C G A T C A C G T T A C G C A G T G T A C A G T C G A C T A G T C G A T C
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCTGTCCTCC
--TGACCYCT
 A T G C G A T C A C G T T A C G C A G T G T A C A G T C G A C T A G T C G A T C
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCTGTCCTCC
--TGACCT--
 A T G C G A T C A C G T T A C G C A G T G T A C A G T C G A C T A G T C G A T C
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCTGTCCTCC
-GTGACCTT-
 A T G C G A T C A C G T T A C G C A G T G T A C A G T C G A C T A G T C G A T C
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTCCTCC-
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T A C G T A C G T A T G C G A T C A C G T T A C G C A G T G T A C A G T C G A C T A G T C G A T C A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCTGTCCTCC
TGACCTTGACCT--
 A C G T A C G T A C G T A C G T A T G C G A T C A C G T T A C G C A G T G T A C A G T C G A C T A G T C G A T C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCTGTCCTCC-
-CTGACCTTTG
 A T G C G A T C A C G T T A C G C A G T G T A C A G T C G A C T A G T C G A T C A C G T
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCTGTCCTCC
GCTGTG----
 A T G C G A T C A C G T T A C G C A G T G T A C A G T C G A C T A G T C G A T C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCTGTCCTCC
CCTGTCAA--
 A T G C G A T C A C G T T A C G C A G T G T A C A G T C G A C T A G T C G A T C
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T