Information for 18-ACTCACTACGTTA (Motif 25)

C G T A A G T C C G A T A G T C C G T A A G T C A C G T C G T A A G T C A C T G A G C T A C G T C G T A
Reverse Opposite:
C G A T C G T A C T G A A G T C A C T G G A C T C G T A A C T G A C G T A C T G C G T A A C T G C G A T
p-value:1e-8
log p-value:-1.964e+01
Information Content per bp:1.864
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.4 +/- 23.0bp
Average Position of motif in Background47.5 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACTCACTACGTTA--
AATCGCACTGCATTCCG
 A C G T A C G T C G T A A G T C C G A T A G T C C G T A A G T C A C G T C G T A A G T C A C T G A G C T A C G T C G T A A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ACTCACTACGTTA
---CACTTCCTCT
 C G T A A G T C C G A T A G T C C G T A A G T C A C G T C G T A A G T C A C T G A G C T A C G T C G T A
A C G T A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T

PB0161.1_Rxra_2/Jaspar

Match Rank:3
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ACTCACTACGTTA
NNNNCAACCTTCGNGA
 A C G T A C G T A C G T C G T A A G T C C G A T A G T C C G T A A G T C A C G T C G T A A G T C A C T G A G C T A C G T C G T A
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ACTCACTACGTTA
AAATCACTGC----
 A C G T C G T A A G T C C G A T A G T C C G T A A G T C A C G T C G T A A G T C A C T G A G C T A C G T C G T A
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:5
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:ACTCACTACGTTA-
------TACGTCAT
 C G T A A G T C C G A T A G T C C G T A A G T C A C G T C G T A A G T C A C T G A G C T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:ACTCACTACGTTA
MRSCACTYAA---
 C G T A A G T C C G A T A G T C C G T A A G T C A C G T C G T A A G T C A C T G A G C T A C G T C G T A
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-ACTCACTACGTTA
GTTTCACTTCCG--
 A C G T C G T A A G T C C G A T A G T C C G T A A G T C A C G T C G T A A G T C A C T G A G C T A C G T C G T A
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:8
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----ACTCACTACGTTA
NATGAGTCACC------
 A C G T A C G T A C G T A C G T C G T A A G T C C G A T A G T C C G T A A G T C A C G T C G T A A G T C A C T G A G C T A C G T C G T A
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:9
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:ACTCACTACGTTA--
NWTGATTRGRTTAWN
 C G T A A G T C C G A T A G T C C G T A A G T C A C G T C G T A A G T C A C T G A G C T A C G T C G T A A C G T A C G T
C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--ACTCACTACGTTA
NNACTTACCTN----
 A C G T A C G T C G T A A G T C C G A T A G T C C G T A A G T C A C G T C G T A A G T C A C T G A G C T A C G T C G T A
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T