Information for 17-GGGMTTTCCSTGG (Motif 23)

C T A G A T C G A C T G G T C A A C G T A C G T C G A T A G T C A G T C A T G C A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A T C G A C T G C T A G C G T A G T C A C G T A A C G T G T A C A T G C A G T C
p-value:1e-9
log p-value:-2.172e+01
Information Content per bp:1.846
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.8 +/- 24.0bp
Average Position of motif in Background30.4 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGGMTTTCCSTGG
GGGGATTTCC----
 A C G T C T A G A T C G A C T G G T C A A C G T A C G T C G A T A G T C A G T C A T G C A C G T A C T G A C T G
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGMTTTCCSTGG
GGGAATTTCC----
 A C G T C T A G A T C G A C T G G T C A A C G T A C G T C G A T A G T C A G T C A T G C A C G T A C T G A C T G
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGMTTTCCSTGG
GGGGATTTCC----
 A C G T C T A G A T C G A C T G G T C A A C G T A C G T C G A T A G T C A G T C A T G C A C G T A C T G A C T G
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGGMTTTCCSTGG
NGGGGATTTCCC---
 A C G T A C G T C T A G A T C G A C T G G T C A A C G T A C G T C G A T A G T C A G T C A T G C A C G T A C T G A C T G
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGGMTTTCCSTGG
GGGAATTTCC----
 A C G T C T A G A T C G A C T G G T C A A C G T A C G T C G A T A G T C A G T C A T G C A C G T A C T G A C T G
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGGMTTTCCSTGG
AGGGGATTCCCCT--
 A C G T A C G T C T A G A T C G A C T G G T C A A C G T A C G T C G A T A G T C A G T C A T G C A C G T A C T G A C T G
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGGMTTTCCSTGG
AGGGGATTCCCCT--
 A C G T A C G T C T A G A T C G A C T G G T C A A C G T A C G T C G A T A G T C A G T C A T G C A C G T A C T G A C T G
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGGMTTTCCSTGG
GGGGATTCCCCC--
 A C G T C T A G A T C G A C T G G T C A A C G T A C G T C G A T A G T C A G T C A T G C A C G T A C T G A C T G
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGGMTTTCCSTGG
NGGGATTA------
 A C G T C T A G A T C G A C T G G T C A A C G T A C G T C G A T A G T C A G T C A T G C A C G T A C T G A C T G
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GGGMTTTCCSTGG
CGTTGGGGATTAGCCT--
 A C G T A C G T A C G T A C G T A C G T C T A G A T C G A C T G G T C A A C G T A C G T C G A T A G T C A G T C A T G C A C G T A C T G A C T G
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T A C G T A C G T