Information for 6-CTTTGCTACC (Motif 22)

A T G C C A G T A G C T C G A T A C T G A G T C A G C T C G T A T A G C A G T C
Reverse Opposite:
C T A G A C T G C G A T C T G A C T A G A G T C C G T A C T G A G C T A A T C G
p-value:1e-9
log p-value:-2.253e+01
Information Content per bp:1.836
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets53.8 +/- 25.9bp
Average Position of motif in Background44.7 +/- 39.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0155.1_Osr2_2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTTTGCTACC------
ACTTGCTACCTACACC
 A T G C C A G T A G C T C G A T A C T G A G T C A G C T C G T A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTTTGCTACC------
TNNTGCTACTGTNNNN
 A T G C C A G T A G C T C G A T A C T G A G T C A G C T C G T A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTTTGCTACC------
CNNNGCTACTGTANNN
 A T G C C A G T A G C T C G A T A C T G A G T C A G C T C G T A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTTTGCTACC------
ACATGCTACCTAATAC
 A T G C C A G T A G C T C G A T A C T G A G T C A G C T C G T A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PB0159.1_Rfx4_2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CTTTGCTACC--
TACCCTAGTTACCGA
 A C G T A C G T A C G T A T G C C A G T A G C T C G A T A C T G A G T C A G C T C G T A T A G C A G T C A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTTTGCTACC---
NCCGTTGCTANGNGN
 A C G T A C G T A T G C C A G T A G C T C G A T A C T G A G T C A G C T C G T A T A G C A G T C A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0158.1_Rfx3_2/Jaspar

Match Rank:7
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------CTTTGCTACC------
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C A G T A G C T C G A T A C T G A G T C A G C T C G T A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGCTACC--
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A C G T A T G C C A G T A G C T C G A T A C T G A G T C A G C T C G T A T A G C A G T C A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTTTGCTACC---
NNCGTTGCTATGGNN
 A C G T A C G T A T G C C A G T A G C T C G A T A C T G A G T C A G C T C G T A T A G C A G T C A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0059.1_Six6_1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTTTGCTACC-----
ANANNTGATACCCNATN
 A C G T A C G T A T G C C A G T A G C T C G A T A C T G A G T C A G C T C G T A T A G C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T