Information for 15-SCTGTGCRGGCTG (Motif 21)

A T G C G T A C A C G T A T C G C A G T A T C G A G T C C T G A A C T G A T C G G T A C A C G T A C T G
Reverse Opposite:
G T A C C G T A A C T G A T G C G T A C G A C T A C T G A T G C G T C A A T G C C G T A A C T G A T C G
p-value:1e-10
log p-value:-2.388e+01
Information Content per bp:1.746
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.66%
Number of Background Sequences with motif50.9
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets44.2 +/- 21.7bp
Average Position of motif in Background51.3 +/- 34.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:SCTGTGCRGGCTG
GCTGTG-------
 A T G C G T A C A C G T A T C G C A G T A T C G A G T C C T G A A C T G A T C G G T A C A C G T A C T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---SCTGTGCRGGCTG-----
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A T G C G T A C A C G T A T C G C A G T A T C G A G T C C T G A A C T G A T C G G T A C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---SCTGTGCRGGCTG----
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A T G C G T A C A C G T A T C G C A G T A T C G A G T C C T G A A C T G A T C G G T A C A C G T A C T G A C G T A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--SCTGTGCRGGCTG
WDNCTGGGCA-----
 A C G T A C G T A T G C G T A C A C G T A T C G C A G T A T C G A G T C C T G A A C T G A T C G G T A C A C G T A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:SCTGTGCRGGCTG
--------NGCTN
 A T G C G T A C A C G T A T C G C A G T A T C G A G T C C T G A A C T G A T C G G T A C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.55
Offset:6
Orientation:forward strand
Alignment:SCTGTGCRGGCTG---
------CCTGCTGAGH
 A T G C G T A C A C G T A T C G C A G T A T C G A G T C C T G A A C T G A T C G G T A C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.52
Offset:6
Orientation:forward strand
Alignment:SCTGTGCRGGCTG-
------TWGTCTGV
 A T G C G T A C A C G T A T C G C A G T A T C G A G T C C T G A A C T G A T C G G T A C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:SCTGTGCRGGCTG-----
---NNTCCTGCTGTGNNN
 A T G C G T A C A C G T A T C G C A G T A T C G A G T C C T G A A C T G A T C G G T A C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-SCTGTGCRGGCTG
ACATGCCCGGGCAT
 A C G T A T G C G T A C A C G T A T C G C A G T A T C G A G T C C T G A A C T G A T C G G T A C A C G T A C T G
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:SCTGTGCRGGCTG--
DCHCAGCAGGRGGCC
 A T G C G T A C A C G T A T C G C A G T A T C G A G T C C T G A A C T G A T C G G T A C A C G T A C T G A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C