Information for 11-MCCCTGCAAAKTG (Motif 17)

G T A C G A T C A G T C A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A G T A C G A C T A C G T A C G T A C T G A G T C C G T A A C T G A C T G C T A G A C T G
p-value:1e-10
log p-value:-2.440e+01
Information Content per bp:1.907
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.8 +/- 11.7bp
Average Position of motif in Background33.1 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX8/MA0868.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-MCCCTGCAAAKTG--
AACACTGCACATTGTT
 A C G T G T A C G A T C A G T C A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T
C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----MCCCTGCAAAKTG
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T G T A C G A T C A G T C A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C G T A C T G
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:MCCCTGCAAAKTG
--GGTGCCAAGT-
 G T A C G A T C A G T C A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C G T A C T G
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:MCCCTGCAAAKTG-
-ATATGCAAATNNN
 G T A C G A T C A G T C A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C G T A C T G A C G T
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:MCCCTGCAAAKTG
-TTATGCAAAT--
 G T A C G A T C A G T C A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C G T A C T G
A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:MCCCTGCAAAKTG
-ATATGCAAAT--
 G T A C G A T C A G T C A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C G T A C T G
A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:MCCCTGCAAAKTG-
--TATGCWAATBAV
 G T A C G A T C A G T C A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C G T A C T G A C G T
A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

GLIS2/MA0736.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---MCCCTGCAAAKTG
GACCCCCCGCGAAG--
 A C G T A C G T A C G T G T A C G A T C A G T C A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C G T A C T G
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-MCCCTGCAAAKTG
CCCCCTGCTGTG--
 A C G T G T A C G A T C A G T C A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C G T A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---MCCCTGCAAAKTG
SNGCACCTGCHS----
 A C G T A C G T A C G T G T A C G A T C A G T C A G T C A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C G T A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T