Information for 7-CYTBTGCTCTCCC (Motif 12)

A G T C G A T C A G C T A G T C C G A T A T C G A G T C A G C T A G T C C G A T A T G C A G T C A T G C
Reverse Opposite:
A T C G C T A G T A C G C G T A A C T G C T G A C T A G T A G C G C T A T C A G C T G A C T A G A C T G
p-value:1e-11
log p-value:-2.612e+01
Information Content per bp:1.680
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.78%
Number of Background Sequences with motif97.1
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets53.5 +/- 25.3bp
Average Position of motif in Background53.2 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LEF1/MA0768.1/Jaspar

Match Rank:1
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CYTBTGCTCTCCC
AACCCTTTGATCTTT-
 A C G T A C G T A C G T A G T C G A T C A G C T A G T C C G A T A T C G A G T C A G C T A G T C C G A T A T G C A G T C A T G C
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CYTBTGCTCTCCC
TGACCTTTGCCCTA--
 A C G T A C G T A C G T A G T C G A T C A G C T A G T C C G A T A T C G A G T C A G C T A G T C C G A T A T G C A G T C A T G C
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CYTBTGCTCTCCC
CCTTTGATCTTT-
 A G T C G A T C A G C T A G T C C G A T A T C G A G T C A G C T A G T C C G A T A T G C A G T C A T G C
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CYTBTGCTCTCCC
GCTCGGSCTC----
 A C G T A G T C G A T C A G C T A G T C C G A T A T C G A G T C A G C T A G T C C G A T A T G C A G T C A T G C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CYTBTGCTCTCCC
CACTTCCTCT---
 A G T C G A T C A G C T A G T C C G A T A T C G A G T C A G C T A G T C C G A T A T G C A G T C A T G C
A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CYTBTGCTCTCCC
TGACCTTTGCCCTAN-
 A C G T A C G T A C G T A G T C G A T C A G C T A G T C C G A T A T C G A G T C A G C T A G T C C G A T A T G C A G T C A T G C
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CYTBTGCTCTCCC---
----KGCCCTTCCCCA
 A G T C G A T C A G C T A G T C C G A T A T C G A G T C A G C T A G T C C G A T A T G C A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CYTBTGCTCTCCC
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A C G T A G T C G A T C A G C T A G T C C G A T A T C G A G T C A G C T A G T C C G A T A T G C A G T C A T G C
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CYTBTGCTCTCCC
-------GCTTCC
 A G T C G A T C A G C T A G T C C G A T A T C G A G T C A G C T A G T C C G A T A T G C A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CYTBTGCTCTCCC
---AASCACTCAA
 A G T C G A T C A G C T A G T C C G A T A T C G A G T C A G C T A G T C C G A T A T G C A G T C A T G C
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A